Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3767

Experiment: Green bean; epiphytic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Green bean; epiphytic
4,483,984	+				+1.2
4,483,984	+				+0.3
4,483,984	+				-0.1
4,484,002	+		Psyr_3766	0.11	-0.7
4,484,034	+		Psyr_3766	0.16	+1.1
4,484,034	+		Psyr_3766	0.16	+0.4
4,484,035	-		Psyr_3766	0.16	-0.1
4,484,091	+		Psyr_3766	0.23	+1.2
4,484,092	-		Psyr_3766	0.24	-1.3
4,484,092	-		Psyr_3766	0.24	+0.9
4,484,199	+		Psyr_3766	0.38	+1.1
4,484,199	+		Psyr_3766	0.38	+1.6
4,484,199	+		Psyr_3766	0.38	+0.6
4,484,199	+		Psyr_3766	0.38	+0.9
4,484,200	-		Psyr_3766	0.38	+0.9
4,484,200	-		Psyr_3766	0.38	+0.4
4,484,236	+		Psyr_3766	0.43	-1.1
4,484,237	-		Psyr_3766	0.43	-0.6
4,484,239	-		Psyr_3766	0.44	-0.0
4,484,363	+		Psyr_3766	0.61	+0.6
4,484,363	+		Psyr_3766	0.61	+0.9
4,484,572	+		Psyr_3766	0.89	-0.4
4,484,572	+		Psyr_3766	0.89	-0.5
4,484,573	-		Psyr_3766	0.89	-0.7
4,484,575	+		Psyr_3766	0.90	+0.1
4,484,576	-		Psyr_3766	0.90	+1.3
4,484,576	-		Psyr_3766	0.90	+0.9
4,484,761	+				-0.5
4,484,762	-				+0.5
4,484,812	+				+0.0
4,484,834	+				+0.9
4,484,834	+				+1.3
4,484,834	+				-0.5
4,484,834	+				+0.9
4,484,834	+				-0.5
4,484,834	+				+0.4
4,484,834	+				-0.5
4,484,834	+				-0.9
4,484,834	+				-0.4
4,484,834	+				-0.3
4,484,834	+				-2.1
4,484,834	+				-0.2
4,484,834	+				+0.1
4,484,834	+				+1.7
4,484,834	+				+0.3
4,484,835	-				-0.1
4,484,835	-				+0.3
4,484,835	-				-0.1
4,484,835	-				+0.3
4,484,835	-				-0.5
4,484,835	-				+0.4
4,484,835	-				-0.2
4,484,835	-				-0.2
4,484,835	-				+1.1
4,484,835	-				+0.1
4,484,835	-				+0.8
4,484,838	+				+0.2
4,484,838	+				-0.7
4,484,838	+				-1.9
4,484,838	+				-0.7
4,484,838	+				-2.1
4,484,838	+				+1.1
4,484,838	+				+0.0
4,484,839	-				-0.4
4,484,839	-				+1.7
4,484,839	-				+1.3
4,484,839	-				+1.6
4,484,839	-				-0.6
4,484,839	-				+1.0
4,484,839	-				+0.3
4,484,839	-				+0.3
4,484,839	-				-1.4
4,484,872	-		Psyr_3767	0.14	+0.9
4,484,872	-		Psyr_3767	0.14	-1.5
4,484,903	-		Psyr_3767	0.26	-0.3
4,484,903	-		Psyr_3767	0.26	+0.0
4,484,903	-		Psyr_3767	0.26	-0.3
4,484,908	+		Psyr_3767	0.28	-0.3
4,484,909	-		Psyr_3767	0.28	-1.9
4,484,941	+		Psyr_3767	0.40	+0.5
4,484,941	+		Psyr_3767	0.40	-1.0
4,484,942	-		Psyr_3767	0.40	-0.7
4,484,987	+		Psyr_3767	0.57	+0.4
4,485,027	+		Psyr_3767	0.72	-0.6
4,485,027	+		Psyr_3767	0.72	-1.4
4,485,028	-		Psyr_3767	0.72	+1.7
4,485,028	-		Psyr_3767	0.72	-0.0
4,485,028	-		Psyr_3767	0.72	-0.7
4,485,084	+				+0.9
4,485,085	-				-0.1
4,485,085	-				-0.6
4,485,124	+				-1.4
4,485,137	-				+0.6
4,485,316	+				+0.5
4,485,317	-				-0.7
4,485,317	-				+0.9
4,485,317	-				-2.0
4,485,320	+				+0.2
4,485,387	+				+0.3
4,485,388	-				+0.3
4,485,388	-				+0.7
4,485,388	-				-0.4
4,485,444	+				+0.6
4,485,619	-				-0.8
4,485,661	+				-0.4
4,485,661	+				+0.4
4,485,661	+				-2.3
4,485,661	+				-0.3
4,485,662	-				-0.7
4,485,662	-				-0.9
4,485,662	-				-0.3
4,485,662	-				-0.1
4,485,680	+				-0.1
4,485,681	-				+0.9
4,485,736	+		Psyr_3768	0.13	-0.7
4,485,748	+		Psyr_3768	0.14	+0.9
4,485,748	+		Psyr_3768	0.14	+1.5
4,485,748	+		Psyr_3768	0.14	+0.7
4,485,748	+		Psyr_3768	0.14	-0.7
4,485,749	-		Psyr_3768	0.14	-0.1
4,485,749	-		Psyr_3768	0.14	-1.2
4,485,749	-		Psyr_3768	0.14	-0.4
4,485,749	-		Psyr_3768	0.14	+0.1
4,485,749	-		Psyr_3768	0.14	+0.4
4,485,749	-		Psyr_3768	0.14	-0.8
4,485,749	-		Psyr_3768	0.14	-0.1
4,485,749	-		Psyr_3768	0.14	+0.5
4,485,749	-		Psyr_3768	0.14	-0.0
4,485,749	-		Psyr_3768	0.14	-0.7
4,485,749	-		Psyr_3768	0.14	+0.6
4,485,850	+		Psyr_3768	0.22	-0.7
4,485,893	-		Psyr_3768	0.25	-0.0
4,485,893	-		Psyr_3768	0.25	+1.5
4,485,893	-		Psyr_3768	0.25	-0.3
4,485,928	+		Psyr_3768	0.28	+0.6
4,485,928	+		Psyr_3768	0.28	-0.1
4,485,928	+		Psyr_3768	0.28	+0.1
4,485,928	+		Psyr_3768	0.28	-1.3
4,485,929	-		Psyr_3768	0.28	+1.2
4,485,929	-		Psyr_3768	0.28	+2.5
4,485,929	-		Psyr_3768	0.28	+1.2
4,485,990	+		Psyr_3768	0.33	-0.1
4,485,990	+		Psyr_3768	0.33	+0.6
4,485,990	+		Psyr_3768	0.33	+0.9
4,485,990	+		Psyr_3768	0.33	+0.6
4,485,990	+		Psyr_3768	0.33	-0.1
4,485,990	+		Psyr_3768	0.33	-0.4
4,485,990	+		Psyr_3768	0.33	-2.1
4,485,990	+		Psyr_3768	0.33	-0.1
4,485,990	+		Psyr_3768	0.33	+0.3
4,485,990	+		Psyr_3768	0.33	+0.5
4,485,990	+		Psyr_3768	0.33	-0.8
4,485,990	+		Psyr_3768	0.33	+1.9
4,485,990	+		Psyr_3768	0.33	+0.1
4,485,990	+		Psyr_3768	0.33	+1.3
4,485,990	+		Psyr_3768	0.33	+0.8
4,485,990	+		Psyr_3768	0.33	+1.2
4,485,990	+		Psyr_3768	0.33	+0.0
4,485,990	+		Psyr_3768	0.33	-1.4
4,485,990	+		Psyr_3768	0.33	+1.4
4,485,991	-		Psyr_3768	0.33	+1.2
4,485,991	-		Psyr_3768	0.33	-0.5
4,485,991	-		Psyr_3768	0.33	-1.1
4,485,991	-		Psyr_3768	0.33	-0.7
4,485,991	-		Psyr_3768	0.33	+0.8
4,485,991	-		Psyr_3768	0.33	+0.4
4,485,991	-		Psyr_3768	0.33	-0.2
4,485,991	-		Psyr_3768	0.33	+0.3
4,485,991	-		Psyr_3768	0.33	-0.1
4,485,991	-		Psyr_3768	0.33	+1.0
4,485,991	-		Psyr_3768	0.33	+0.3
4,485,991	-		Psyr_3768	0.33	+0.3
4,485,991	-		Psyr_3768	0.33	+1.1
4,485,991	-		Psyr_3768	0.33	-1.1
4,485,991	-		Psyr_3768	0.33	+0.2
4,485,991	-		Psyr_3768	0.33	+2.8
4,485,991	-		Psyr_3768	0.33	+1.9
4,485,991	-		Psyr_3768	0.33	+1.6
4,485,991	-		Psyr_3768	0.33	-0.3
4,485,991	-		Psyr_3768	0.33	+0.2
4,485,991	-		Psyr_3768	0.33	+0.9
4,485,991	-		Psyr_3768	0.33	+0.4
4,485,991	-		Psyr_3768	0.33	+1.6
4,485,991	-		Psyr_3768	0.33	+0.6
4,486,047	-		Psyr_3768	0.37	-0.3
4,486,089	+		Psyr_3768	0.40	-1.2