Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06322

Experiment: 2-Deoxy-D-ribonic lithium salt (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06321 and H281DRAFT_06322 are separated by 91 nucleotidesH281DRAFT_06322 and H281DRAFT_06323 are separated by 36 nucleotides H281DRAFT_06321: H281DRAFT_06321 - leucyl-tRNA synthetase, at 104,455 to 107,046 _06321 H281DRAFT_06322: H281DRAFT_06322 - LPS-assembly lipoprotein, at 107,138 to 107,692 _06322 H281DRAFT_06323: H281DRAFT_06323 - DNA polymerase III, delta subunit, at 107,729 to 108,853 _06323 Position (kb) 107 108Strain fitness (log2 ratio) -2 -1 0 1at 107.225 kb on + strand, within H281DRAFT_06322at 107.438 kb on + strand, within H281DRAFT_06322at 107.510 kb on + strand, within H281DRAFT_06322at 107.512 kb on + strand, within H281DRAFT_06322at 107.522 kb on + strand, within H281DRAFT_06322at 107.720 kb on + strandat 107.720 kb on + strandat 107.720 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C)
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107,225 + H281DRAFT_06322 0.16 -1.3
107,438 + H281DRAFT_06322 0.54 -0.4
107,510 + H281DRAFT_06322 0.67 -2.6
107,512 + H281DRAFT_06322 0.67 -1.0
107,522 + H281DRAFT_06322 0.69 -1.4
107,720 + -0.1
107,720 + +0.5
107,720 + -1.4

Or see this region's nucleotide sequence