Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03067

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,218,585	+		CCNA_03066	0.60	-0.4
3,218,591	+		CCNA_03066	0.60	+1.9
3,218,596	+		CCNA_03066	0.61	-1.1
3,218,613	+		CCNA_03066	0.61	+0.8
3,218,640	+		CCNA_03066	0.63	-0.5
3,218,670	+		CCNA_03066	0.64	+0.4
3,218,672	+		CCNA_03066	0.64	-0.5
3,218,810	+		CCNA_03066	0.71	-0.8
3,218,810	+		CCNA_03066	0.71	-0.5
3,218,810	+		CCNA_03066	0.71	+1.5
3,218,818	-		CCNA_03066	0.71	-0.9
3,218,829	+		CCNA_03066	0.72	-1.0
3,218,842	+		CCNA_03066	0.72	-2.0
3,218,850	-		CCNA_03066	0.73	+0.2
3,218,874	-		CCNA_03066	0.74	-1.0
3,218,904	+		CCNA_03066	0.75	+0.6
3,218,904	+		CCNA_03066	0.75	+0.7
3,218,994	-		CCNA_03066	0.80	+0.5
3,219,021	-		CCNA_03066	0.81	+0.9
3,219,048	+		CCNA_03066	0.82	-0.5
3,219,098	+		CCNA_03066	0.85	+2.2
3,219,098	+		CCNA_03066	0.85	+0.0
3,219,098	+		CCNA_03066	0.85	-0.5
3,219,098	+		CCNA_03066	0.85	+0.6
3,219,098	+		CCNA_03066	0.85	+0.8
3,219,106	-		CCNA_03066	0.85	-1.4
3,219,174	-		CCNA_03066	0.88	-1.9
3,219,174	-		CCNA_03066	0.88	+0.4
3,219,222	-				-0.5
3,219,237	-				-0.2
3,219,237	-				-0.6
3,219,264	+				-1.1
3,219,270	-				+0.6
3,219,272	-				-0.9
3,219,278	+				-1.4
3,219,278	+				-0.6
3,219,281	-				+0.3
3,219,286	-				-0.3
3,219,304	-				-1.2
3,219,366	+				-1.1
3,219,374	-				-0.9
3,219,374	-				-0.0
3,219,376	+				-0.6
3,219,376	+				-0.4
3,219,376	+				-0.1
3,219,384	-				+1.9
3,219,393	+				+1.3
3,219,415	+				-0.7
3,219,452	+				-2.4
3,219,452	+				-1.7
3,219,454	+				-0.3
3,219,454	+				-1.8
3,219,460	-				+0.6
3,219,460	-				-1.7
3,219,472	-				-1.1
3,219,550	+				-0.4
3,219,552	-				-0.7
3,219,568	-				-2.0
3,219,568	-				+0.5
3,219,573	-				-0.7
3,219,573	-				-2.0
3,219,609	-		CCNA_03067	0.12	+0.6
3,219,628	-		CCNA_03067	0.17	-0.4
3,219,628	-		CCNA_03067	0.17	+0.5
3,219,628	-		CCNA_03067	0.17	+1.1
3,219,651	+		CCNA_03067	0.22	-0.5
3,219,659	+		CCNA_03067	0.24	+0.7
3,219,659	+		CCNA_03067	0.24	-1.0
3,219,702	-		CCNA_03067	0.35	+0.9
3,219,707	-		CCNA_03067	0.36	+1.3
3,219,708	+		CCNA_03067	0.37	-0.6
3,219,716	-		CCNA_03067	0.39	+2.9
3,219,743	+		CCNA_03067	0.45	-2.2
3,219,750	-		CCNA_03067	0.47	+2.9
3,219,751	-		CCNA_03067	0.47	+2.5
3,219,777	+		CCNA_03067	0.54	-0.5
3,219,792	-		CCNA_03067	0.58	+1.6
3,219,806	-		CCNA_03067	0.61	+1.8
3,219,825	+		CCNA_03067	0.66	-0.5
3,219,834	-		CCNA_03067	0.68	+1.4
3,219,834	-		CCNA_03067	0.68	+1.8
3,219,844	-		CCNA_03067	0.71	+1.3
3,219,876	-		CCNA_03067	0.79	+1.6
3,219,882	+		CCNA_03067	0.80	-1.8
3,219,884	+		CCNA_03067	0.81	-1.2
3,219,890	-		CCNA_03067	0.82	+1.1
3,220,031	+				-1.2
3,220,031	+				+0.4
3,220,031	+				+0.6
3,220,058	+				-1.6
3,220,077	+				-2.0
3,220,077	+				-1.3
3,220,085	-				-0.1
3,220,128	-				-1.6
3,220,135	+		CCNA_03068	0.10	-1.2
3,220,203	-		CCNA_03068	0.21	+0.2
3,220,205	-		CCNA_03068	0.21	+1.9
3,220,226	-		CCNA_03068	0.24	+0.6
3,220,284	+		CCNA_03068	0.34	-1.8
3,220,292	-		CCNA_03068	0.35	-2.0
3,220,298	-		CCNA_03068	0.36	+0.8
3,220,307	+		CCNA_03068	0.37	-1.0
3,220,315	-		CCNA_03068	0.39	-2.2
3,220,359	-		CCNA_03068	0.46	+0.5
3,220,361	+		CCNA_03068	0.46	-0.4
3,220,366	+		CCNA_03068	0.47	-0.4
3,220,368	-		CCNA_03068	0.47	-0.4
3,220,376	+		CCNA_03068	0.48	+0.0
3,220,381	+		CCNA_03068	0.49	-0.5
3,220,384	-		CCNA_03068	0.50	+0.5
3,220,384	-		CCNA_03068	0.50	+2.1
3,220,386	+		CCNA_03068	0.50	+1.2
3,220,386	+		CCNA_03068	0.50	-0.6
3,220,389	-		CCNA_03068	0.50	+0.2
3,220,394	-		CCNA_03068	0.51	+0.6
3,220,434	+		CCNA_03068	0.57	+0.4
3,220,438	-		CCNA_03068	0.58	-0.7
3,220,440	+		CCNA_03068	0.58	+0.7
3,220,448	-		CCNA_03068	0.60	-1.0
3,220,454	-		CCNA_03068	0.61	+0.4
3,220,455	-		CCNA_03068	0.61	+0.8
3,220,459	-		CCNA_03068	0.61	-1.4
3,220,508	+		CCNA_03068	0.69	-0.8
3,220,509	-		CCNA_03068	0.69	+0.3
3,220,516	-		CCNA_03068	0.70	+0.6
3,220,519	+		CCNA_03068	0.71	-0.8
3,220,524	+		CCNA_03068	0.72	-0.7
3,220,533	-		CCNA_03068	0.73	-2.4
3,220,541	+		CCNA_03068	0.74	-3.3
3,220,597	+		CCNA_03068	0.83	+0.0
3,220,602	+		CCNA_03068	0.84	-0.5
3,220,627	-		CCNA_03068	0.88	-0.8
3,220,629	+		CCNA_03068	0.88	-0.6
3,220,630	+		CCNA_03068	0.89	-0.5
3,220,638	-		CCNA_03068	0.90	+0.9
3,220,638	-		CCNA_03068	0.90	+1.2
3,220,643	-				-0.1
3,220,670	-				+0.1
3,220,672	+				+0.4
3,220,675	-				-0.5
3,220,692	+				-0.4
3,220,694	+				-1.8
3,220,747	-		CCNA_03069	0.13	-0.1
3,220,749	+		CCNA_03069	0.14	-1.7
3,220,749	+		CCNA_03069	0.14	-1.1
3,220,749	+		CCNA_03069	0.14	-1.4
3,220,749	+		CCNA_03069	0.14	-2.1
3,220,749	+		CCNA_03069	0.14	+0.0
3,220,749	+		CCNA_03069	0.14	+0.1
3,220,749	+				+1.2
3,220,749	+		CCNA_03069	0.14	-1.8
3,220,749	+		CCNA_03069	0.14	-2.1
3,220,749	+		CCNA_03069	0.14	+0.5
3,220,757	-		CCNA_03069	0.16	+0.4
3,220,757	-		CCNA_03069	0.16	+1.2
3,220,757	-		CCNA_03069	0.16	-2.1
3,220,757	-		CCNA_03069	0.16	-0.2
3,220,757	-		CCNA_03069	0.16	-2.8
3,220,757	-		CCNA_03069	0.16	-1.8
3,220,757	-		CCNA_03069	0.16	-1.2
3,220,757	-		CCNA_03069	0.16	-0.8
3,220,759	-		CCNA_03069	0.16	-3.0
3,220,791	-		CCNA_03069	0.25	-1.3
3,220,824	+		CCNA_03069	0.34	+0.3
3,220,825	-		CCNA_03069	0.34	-1.9
3,220,876	-		CCNA_03069	0.48	-1.0
3,220,899	-		CCNA_03069	0.54	+2.6
3,220,899	-		CCNA_03069	0.54	-0.4