Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29980 and AZOBR_RS29985 are separated by 30 nucleotides AZOBR_RS29985 and AZOBR_RS29990 are separated by 303 nucleotides
AZOBR_RS29980: AZOBR_RS29980 - saccharopine dehydrogenase, at 66,283 to 67,410
_RS29980
AZOBR_RS29985: AZOBR_RS29985 - pyruvate oxidase, at 67,441 to 69,195
_RS29985
AZOBR_RS29990: AZOBR_RS29990 - putative dioxygenase subunit, at 69,499 to 70,425
_RS29990
Position (kb) 67
68
69
70 Strain fitness (log2 ratio) -2
-1
0
1 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.767 kb on - strand, within AZOBR_RS29980 at 66.898 kb on + strand, within AZOBR_RS29980 at 67.178 kb on - strand, within AZOBR_RS29980 at 67.204 kb on + strand, within AZOBR_RS29980 at 67.442 kb on + strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.731 kb on - strand, within AZOBR_RS29985 at 67.731 kb on - strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.877 kb on + strand, within AZOBR_RS29985 at 68.330 kb on + strand, within AZOBR_RS29985 at 68.330 kb on + strand, within AZOBR_RS29985 at 68.331 kb on - strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.340 kb on - strand, within AZOBR_RS29985 at 68.814 kb on - strand, within AZOBR_RS29985 at 68.864 kb on + strand, within AZOBR_RS29985 at 68.864 kb on + strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.886 kb on - strand, within AZOBR_RS29985 at 68.886 kb on - strand, within AZOBR_RS29985 at 68.936 kb on + strand, within AZOBR_RS29985 at 68.937 kb on - strand, within AZOBR_RS29985 at 68.937 kb on - strand, within AZOBR_RS29985 at 69.335 kb on - strand at 69.458 kb on + strand at 69.459 kb on - strand at 69.459 kb on - strand at 69.514 kb on - strand at 69.514 kb on - strand at 69.638 kb on - strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.893 kb on - strand, within AZOBR_RS29990 at 70.040 kb on - strand, within AZOBR_RS29990
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 66,766 + AZOBR_RS29980 0.43 -0.2 66,766 + AZOBR_RS29980 0.43 +1.4 66,766 + AZOBR_RS29980 0.43 +1.2 66,767 - AZOBR_RS29980 0.43 +0.1 66,898 + AZOBR_RS29980 0.55 +0.3 67,178 - AZOBR_RS29980 0.79 -1.4 67,204 + AZOBR_RS29980 0.82 -0.4 67,442 + -0.7 67,443 - +0.0 67,443 - -0.5 67,443 - -0.2 67,443 - +0.9 67,443 - +0.1 67,731 - AZOBR_RS29985 0.17 +0.1 67,731 - AZOBR_RS29985 0.17 -0.0 67,820 + AZOBR_RS29985 0.22 +0.6 67,820 + AZOBR_RS29985 0.22 -0.7 67,820 + AZOBR_RS29985 0.22 +0.2 67,877 + AZOBR_RS29985 0.25 -1.3 68,330 + AZOBR_RS29985 0.51 +0.5 68,330 + AZOBR_RS29985 0.51 -0.3 68,331 - AZOBR_RS29985 0.51 +0.0 68,339 + AZOBR_RS29985 0.51 +0.2 68,339 + AZOBR_RS29985 0.51 -2.0 68,339 + AZOBR_RS29985 0.51 +0.2 68,339 + AZOBR_RS29985 0.51 -0.1 68,340 - AZOBR_RS29985 0.51 -0.5 68,814 - AZOBR_RS29985 0.78 -0.5 68,864 + AZOBR_RS29985 0.81 -1.9 68,864 + AZOBR_RS29985 0.81 -0.4 68,865 - AZOBR_RS29985 0.81 -0.3 68,865 - AZOBR_RS29985 0.81 -0.2 68,865 - AZOBR_RS29985 0.81 -0.4 68,865 - AZOBR_RS29985 0.81 +0.1 68,886 - AZOBR_RS29985 0.82 -0.2 68,886 - AZOBR_RS29985 0.82 -0.3 68,936 + AZOBR_RS29985 0.85 +0.3 68,937 - AZOBR_RS29985 0.85 -0.4 68,937 - AZOBR_RS29985 0.85 -2.4 69,335 - +0.1 69,458 + -0.1 69,459 - +0.3 69,459 - -0.2 69,514 - -1.0 69,514 - +0.6 69,638 - AZOBR_RS29990 0.15 +0.3 69,892 + AZOBR_RS29990 0.42 -2.1 69,892 + AZOBR_RS29990 0.42 -1.0 69,892 + AZOBR_RS29990 0.42 +0.3 69,893 - AZOBR_RS29990 0.43 -0.3 70,040 - AZOBR_RS29990 0.58 -0.1
Or see this region's nucleotide sequence