Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27545 and AZOBR_RS27550 are separated by 183 nucleotides AZOBR_RS27550 and AZOBR_RS27555 are separated by 20 nucleotides AZOBR_RS27555 and AZOBR_RS27560 are separated by 482 nucleotides AZOBR_RS27560 and AZOBR_RS27565 are separated by 14 nucleotides
AZOBR_RS27545: AZOBR_RS27545 - short-chain dehydrogenase, at 342,940 to 343,728
_RS27545
AZOBR_RS27550: AZOBR_RS27550 - transcriptional regulator, at 343,912 to 344,268
_RS27550
AZOBR_RS27555: AZOBR_RS27555 - hypothetical protein, at 344,289 to 344,822
_RS27555
AZOBR_RS27560: AZOBR_RS27560 - hypothetical protein, at 345,305 to 345,634
_RS27560
AZOBR_RS27565: AZOBR_RS27565 - GntR family transcriptional regulator, at 345,649 to 347,049
_RS27565
Position (kb) 344
345 Strain fitness (log2 ratio) -1
0
1 at 343.391 kb on - strand, within AZOBR_RS27545 at 343.816 kb on + strand at 343.816 kb on + strand at 343.817 kb on - strand at 343.817 kb on - strand at 343.820 kb on - strand at 343.858 kb on + strand at 343.858 kb on + strand at 343.859 kb on - strand at 343.872 kb on + strand at 343.873 kb on - strand at 343.873 kb on - strand at 343.886 kb on - strand at 344.120 kb on - strand, within AZOBR_RS27550 at 344.266 kb on + strand at 344.266 kb on + strand at 344.392 kb on + strand, within AZOBR_RS27555 at 344.485 kb on + strand, within AZOBR_RS27555 at 344.485 kb on + strand, within AZOBR_RS27555 at 344.486 kb on - strand, within AZOBR_RS27555 at 344.533 kb on + strand, within AZOBR_RS27555 at 344.533 kb on + strand, within AZOBR_RS27555 at 344.533 kb on + strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.542 kb on + strand, within AZOBR_RS27555 at 344.629 kb on + strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.822 kb on + strand at 344.823 kb on - strand at 344.823 kb on - strand at 345.025 kb on + strand at 345.026 kb on + strand at 345.026 kb on - strand at 345.026 kb on - strand at 345.026 kb on - strand at 345.102 kb on + strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.805 kb on + strand, within AZOBR_RS27565 at 345.805 kb on + strand, within AZOBR_RS27565 at 345.806 kb on - strand, within AZOBR_RS27565
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 343,391 - AZOBR_RS27545 0.57 +0.0 343,816 + +0.1 343,816 + +0.6 343,817 - +0.5 343,817 - -0.4 343,820 - -0.0 343,858 + -0.4 343,858 + +0.5 343,859 - +0.2 343,872 + -0.5 343,873 - -0.3 343,873 - +0.2 343,886 - -1.6 344,120 - AZOBR_RS27550 0.58 -0.6 344,266 + +0.2 344,266 + -0.8 344,392 + AZOBR_RS27555 0.19 -0.1 344,485 + AZOBR_RS27555 0.37 +0.9 344,485 + AZOBR_RS27555 0.37 +0.1 344,486 - AZOBR_RS27555 0.37 -0.1 344,533 + AZOBR_RS27555 0.46 +0.0 344,533 + AZOBR_RS27555 0.46 +0.0 344,533 + AZOBR_RS27555 0.46 +1.0 344,534 - AZOBR_RS27555 0.46 +0.3 344,534 - AZOBR_RS27555 0.46 -0.3 344,534 - AZOBR_RS27555 0.46 +0.6 344,534 - AZOBR_RS27555 0.46 -0.1 344,542 + AZOBR_RS27555 0.47 +1.0 344,629 + AZOBR_RS27555 0.64 +0.7 344,630 - AZOBR_RS27555 0.64 -0.2 344,630 - AZOBR_RS27555 0.64 +0.3 344,630 - AZOBR_RS27555 0.64 +1.0 344,630 - AZOBR_RS27555 0.64 +0.3 344,822 + +0.9 344,823 - -0.8 344,823 - -0.4 345,025 + +0.4 345,026 + -1.1 345,026 - +0.6 345,026 - -0.6 345,026 - +0.7 345,102 + +0.1 345,103 - +1.1 345,103 - +0.3 345,103 - -0.3 345,103 - -0.2 345,103 - +0.2 345,805 + AZOBR_RS27565 0.11 +1.0 345,805 + AZOBR_RS27565 0.11 +0.5 345,806 - AZOBR_RS27565 0.11 +0.1
Or see this region's nucleotide sequence