Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26365 and AZOBR_RS26370 are separated by 185 nucleotides AZOBR_RS26370 and AZOBR_RS26375 are separated by 42 nucleotides AZOBR_RS26375 and AZOBR_RS26380 are separated by 244 nucleotides
AZOBR_RS26365: AZOBR_RS26365 - cytosine deaminase, at 61,807 to 63,078
_RS26365
AZOBR_RS26370: AZOBR_RS26370 - alpha/beta hydrolase, at 63,264 to 64,028
_RS26370
AZOBR_RS26375: AZOBR_RS26375 - hypothetical protein, at 64,071 to 64,952
_RS26375
AZOBR_RS26380: AZOBR_RS26380 - GntR family transcriptional regulator, at 65,197 to 65,904
_RS26380
Position (kb) 64
65 Strain fitness (log2 ratio) -2
-1
0
1 at 63.508 kb on + strand, within AZOBR_RS26370 at 63.626 kb on + strand, within AZOBR_RS26370 at 63.627 kb on - strand, within AZOBR_RS26370 at 63.627 kb on - strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.783 kb on + strand, within AZOBR_RS26370 at 63.784 kb on - strand, within AZOBR_RS26370 at 63.784 kb on - strand, within AZOBR_RS26370 at 63.784 kb on - strand, within AZOBR_RS26370 at 64.028 kb on + strand at 64.029 kb on - strand at 64.311 kb on + strand, within AZOBR_RS26375 at 64.407 kb on - strand, within AZOBR_RS26375 at 64.454 kb on - strand, within AZOBR_RS26375 at 64.454 kb on - strand, within AZOBR_RS26375 at 64.471 kb on + strand, within AZOBR_RS26375 at 64.702 kb on + strand, within AZOBR_RS26375 at 64.702 kb on + strand, within AZOBR_RS26375 at 64.819 kb on + strand, within AZOBR_RS26375 at 65.704 kb on + strand, within AZOBR_RS26380 at 65.704 kb on + strand, within AZOBR_RS26380 at 65.789 kb on - strand, within AZOBR_RS26380
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 63,508 + AZOBR_RS26370 0.32 -0.1 63,626 + AZOBR_RS26370 0.47 -0.2 63,627 - AZOBR_RS26370 0.47 -0.5 63,627 - AZOBR_RS26370 0.47 -0.3 63,783 + AZOBR_RS26370 0.68 -2.1 63,783 + AZOBR_RS26370 0.68 -0.4 63,783 + AZOBR_RS26370 0.68 -2.2 63,783 + AZOBR_RS26370 0.68 -1.4 63,784 - AZOBR_RS26370 0.68 -1.0 63,784 - AZOBR_RS26370 0.68 -0.8 63,784 - AZOBR_RS26370 0.68 +0.6 64,028 + +0.3 64,029 - +1.2 64,311 + AZOBR_RS26375 0.27 -1.3 64,407 - AZOBR_RS26375 0.38 -1.3 64,454 - AZOBR_RS26375 0.43 -0.8 64,454 - AZOBR_RS26375 0.43 +0.3 64,471 + AZOBR_RS26375 0.45 -0.2 64,702 + AZOBR_RS26375 0.72 +0.7 64,702 + AZOBR_RS26375 0.72 +0.6 64,819 + AZOBR_RS26375 0.85 -1.0 65,704 + AZOBR_RS26380 0.72 -2.7 65,704 + AZOBR_RS26380 0.72 +0.1 65,789 - AZOBR_RS26380 0.84 -1.4
Or see this region's nucleotide sequence