Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25645 and AZOBR_RS25650 are separated by 82 nucleotides AZOBR_RS25650 and AZOBR_RS25655 are separated by 71 nucleotides AZOBR_RS25655 and AZOBR_RS25660 are separated by 348 nucleotides
AZOBR_RS25645: AZOBR_RS25645 - amino acid ABC transporter substrate-binding protein, at 801,230 to 802,342
_RS25645
AZOBR_RS25650: AZOBR_RS25650 - hypothetical protein, at 802,425 to 802,889
_RS25650
AZOBR_RS25655: AZOBR_RS25655 - oxidoreductase, at 802,961 to 804,241
_RS25655
AZOBR_RS25660: AZOBR_RS25660 - amidohydrolase, at 804,590 to 805,762
_RS25660
Position (kb) 802
803
804
805 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 802.008 kb on + strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.218 kb on + strand, within AZOBR_RS25645 at 802.219 kb on - strand, within AZOBR_RS25645 at 802.219 kb on - strand, within AZOBR_RS25645 at 802.252 kb on - strand at 802.400 kb on - strand at 802.414 kb on + strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.855 kb on + strand at 802.855 kb on + strand at 802.877 kb on - strand at 803.100 kb on + strand, within AZOBR_RS25655 at 803.100 kb on + strand, within AZOBR_RS25655 at 803.238 kb on + strand, within AZOBR_RS25655 at 803.238 kb on + strand, within AZOBR_RS25655 at 803.239 kb on - strand, within AZOBR_RS25655 at 803.526 kb on + strand, within AZOBR_RS25655 at 803.526 kb on + strand, within AZOBR_RS25655 at 803.731 kb on - strand, within AZOBR_RS25655 at 803.731 kb on - strand, within AZOBR_RS25655 at 803.733 kb on + strand, within AZOBR_RS25655 at 803.734 kb on - strand, within AZOBR_RS25655 at 804.343 kb on + strand at 804.356 kb on - strand at 804.422 kb on + strand at 804.422 kb on + strand at 804.524 kb on + strand at 804.524 kb on + strand at 804.525 kb on - strand at 804.525 kb on - strand at 804.525 kb on - strand at 804.634 kb on - strand at 804.634 kb on - strand at 804.672 kb on + strand at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.891 kb on + strand, within AZOBR_RS25660 at 805.036 kb on + strand, within AZOBR_RS25660 at 805.215 kb on + strand, within AZOBR_RS25660 at 805.216 kb on - strand, within AZOBR_RS25660
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 802,008 + AZOBR_RS25645 0.70 -0.0 802,009 - AZOBR_RS25645 0.70 +0.3 802,009 - AZOBR_RS25645 0.70 +0.3 802,009 - AZOBR_RS25645 0.70 +0.1 802,218 + AZOBR_RS25645 0.89 -0.3 802,219 - AZOBR_RS25645 0.89 -0.6 802,219 - AZOBR_RS25645 0.89 +0.6 802,252 - +0.2 802,400 - -0.2 802,414 + -0.3 802,415 - -2.5 802,415 - -0.8 802,415 - +0.1 802,415 - -0.2 802,855 + -0.3 802,855 + -2.1 802,877 - -0.1 803,100 + AZOBR_RS25655 0.11 -0.1 803,100 + AZOBR_RS25655 0.11 -0.4 803,238 + AZOBR_RS25655 0.22 -1.0 803,238 + AZOBR_RS25655 0.22 -0.3 803,239 - AZOBR_RS25655 0.22 +0.1 803,526 + AZOBR_RS25655 0.44 -0.3 803,526 + AZOBR_RS25655 0.44 -0.2 803,731 - AZOBR_RS25655 0.60 -0.3 803,731 - AZOBR_RS25655 0.60 +0.1 803,733 + AZOBR_RS25655 0.60 -0.3 803,734 - AZOBR_RS25655 0.60 -0.4 804,343 + -0.0 804,356 - -0.5 804,422 + -1.8 804,422 + +0.8 804,524 + +0.1 804,524 + -0.4 804,525 - +0.0 804,525 - -1.1 804,525 - -0.0 804,634 - -1.1 804,634 - -0.7 804,672 + -2.8 804,729 + AZOBR_RS25660 0.12 -0.4 804,729 + AZOBR_RS25660 0.12 -0.4 804,729 + AZOBR_RS25660 0.12 +0.6 804,729 + AZOBR_RS25660 0.12 -0.9 804,729 + AZOBR_RS25660 0.12 -1.2 804,729 + AZOBR_RS25660 0.12 -0.9 804,891 + AZOBR_RS25660 0.26 -0.5 805,036 + AZOBR_RS25660 0.38 -2.0 805,215 + AZOBR_RS25660 0.53 -2.0 805,216 - AZOBR_RS25660 0.53 -0.3
Or see this region's nucleotide sequence