Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23320 and AZOBR_RS23325 are separated by 466 nucleotides AZOBR_RS23325 and AZOBR_RS23330 are separated by 610 nucleotides
AZOBR_RS23320: AZOBR_RS23320 - C4-dicarboxylate ABC transporter permease, at 256,912 to 258,414
_RS23320
AZOBR_RS23325: AZOBR_RS23325 - RNA polymerase sigma70, at 258,881 to 259,414
_RS23325
AZOBR_RS23330: AZOBR_RS23330 - hypothetical protein, at 260,025 to 262,013
_RS23330
Position (kb) 258
259
260 Strain fitness (log2 ratio) -1
0
1 at 257.977 kb on + strand, within AZOBR_RS23320 at 257.978 kb on - strand, within AZOBR_RS23320 at 258.080 kb on - strand, within AZOBR_RS23320 at 258.182 kb on - strand, within AZOBR_RS23320 at 258.496 kb on + strand at 258.830 kb on - strand at 259.227 kb on + strand, within AZOBR_RS23325 at 259.785 kb on + strand at 259.786 kb on - strand at 259.904 kb on + strand at 260.154 kb on + strand at 260.184 kb on + strand at 260.184 kb on + strand at 260.185 kb on - strand at 260.244 kb on + strand, within AZOBR_RS23330 at 260.244 kb on + strand, within AZOBR_RS23330 at 260.253 kb on + strand, within AZOBR_RS23330 at 260.254 kb on - strand, within AZOBR_RS23330 at 260.265 kb on + strand, within AZOBR_RS23330 at 260.265 kb on + strand, within AZOBR_RS23330 at 260.265 kb on + strand, within AZOBR_RS23330 at 260.322 kb on + strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 257,977 + AZOBR_RS23320 0.71 +0.2 257,978 - AZOBR_RS23320 0.71 +0.2 258,080 - AZOBR_RS23320 0.78 -0.1 258,182 - AZOBR_RS23320 0.84 +0.1 258,496 + +0.0 258,830 - -0.1 259,227 + AZOBR_RS23325 0.65 +0.3 259,785 + -0.3 259,786 - -0.3 259,904 + -0.5 260,154 + -0.2 260,184 + -0.1 260,184 + +0.1 260,185 - -0.1 260,244 + AZOBR_RS23330 0.11 +0.1 260,244 + AZOBR_RS23330 0.11 -0.0 260,253 + AZOBR_RS23330 0.11 -0.3 260,254 - AZOBR_RS23330 0.12 -1.1 260,265 + AZOBR_RS23330 0.12 -0.0 260,265 + AZOBR_RS23330 0.12 -0.8 260,265 + AZOBR_RS23330 0.12 -0.2 260,322 + AZOBR_RS23330 0.15 +0.7 260,323 - AZOBR_RS23330 0.15 +0.3 260,323 - AZOBR_RS23330 0.15 -1.2 260,323 - AZOBR_RS23330 0.15 -0.2 260,323 - AZOBR_RS23330 0.15 -0.9 260,323 - AZOBR_RS23330 0.15 -0.3 260,323 - AZOBR_RS23330 0.15 +0.3 260,323 - AZOBR_RS23330 0.15 -0.8
Or see this region's nucleotide sequence