Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS10585

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
2,220,099	-				-1.9
2,220,209	+		AZOBR_RS10580	0.20	-2.0
2,220,209	+		AZOBR_RS10580	0.20	-2.7
2,220,209	+		AZOBR_RS10580	0.20	-2.0
2,220,272	+		AZOBR_RS10580	0.27	-0.8
2,220,536	+		AZOBR_RS10580	0.55	-1.8
2,220,548	+		AZOBR_RS10580	0.57	-2.0
2,220,549	-		AZOBR_RS10580	0.57	-1.7
2,220,728	+		AZOBR_RS10580	0.76	-2.1
2,220,887	+				-1.8
2,220,888	-				-1.9
2,220,888	-				+0.1
2,220,951	+				-4.1
2,220,951	+				-0.2
2,220,951	+				-2.3
2,220,951	+				+0.1
2,220,952	-				-0.7
2,220,952	-				-1.6
2,220,953	+				-2.0
2,221,108	-				-0.1
2,221,188	+		AZOBR_RS10585	0.10	-1.7
2,221,188	+		AZOBR_RS10585	0.10	-1.4
2,221,189	-		AZOBR_RS10585	0.11	-0.6
2,221,429	-		AZOBR_RS10585	0.25	+0.2
2,221,449	+		AZOBR_RS10585	0.27	-0.7
2,221,450	-		AZOBR_RS10585	0.27	-0.0
2,221,450	-		AZOBR_RS10585	0.27	-1.7
2,221,450	-		AZOBR_RS10585	0.27	+0.4
2,221,450	-		AZOBR_RS10585	0.27	+0.5
2,221,450	-		AZOBR_RS10585	0.27	-0.2
2,221,452	+		AZOBR_RS10585	0.27	-0.1
2,221,453	-		AZOBR_RS10585	0.27	+2.8
2,221,453	-		AZOBR_RS10585	0.27	-0.4
2,221,653	+		AZOBR_RS10585	0.39	-1.2
2,221,686	+		AZOBR_RS10585	0.41	-0.4
2,221,686	+		AZOBR_RS10585	0.41	-3.0
2,221,686	+		AZOBR_RS10585	0.41	-1.1
2,221,687	-		AZOBR_RS10585	0.41	-0.1
2,221,687	-		AZOBR_RS10585	0.41	-0.9
2,221,740	+		AZOBR_RS10585	0.45	-1.7
2,221,740	+		AZOBR_RS10585	0.45	-0.5
2,221,756	-		AZOBR_RS10585	0.46	-0.7
2,221,830	+		AZOBR_RS10585	0.50	-2.2
2,221,830	+		AZOBR_RS10585	0.50	-1.6
2,221,831	-		AZOBR_RS10585	0.50	-0.2
2,221,831	-		AZOBR_RS10585	0.50	-0.3
2,222,639	-				-0.7
2,222,701	-				+0.7
2,222,846	-		AZOBR_RS10590	0.17	-0.2
2,222,846	-		AZOBR_RS10590	0.17	+0.0
2,222,886	+		AZOBR_RS10590	0.22	-1.5
2,222,886	+		AZOBR_RS10590	0.22	-1.8
2,222,887	-		AZOBR_RS10590	0.22	+0.3
2,222,890	-		AZOBR_RS10590	0.22	-0.1
2,222,890	-		AZOBR_RS10590	0.22	-0.2
2,223,141	+		AZOBR_RS10590	0.51	-0.5
2,223,151	-		AZOBR_RS10590	0.52	-0.5
2,223,211	-		AZOBR_RS10590	0.59	-0.5