Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS09135
Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 2 mM |
---|---|---|---|---|---|
remove | |||||
1,908,053 | + | -0.3 | |||
1,908,054 | - | -1.3 | |||
1,908,290 | + | AZOBR_RS09130 | 0.30 | +0.5 | |
1,908,291 | - | AZOBR_RS09130 | 0.30 | -0.1 | |
1,908,291 | - | AZOBR_RS09130 | 0.30 | -0.1 | |
1,908,291 | - | AZOBR_RS09130 | 0.30 | +0.4 | |
1,908,336 | - | AZOBR_RS09130 | 0.35 | -0.8 | |
1,908,455 | + | AZOBR_RS09130 | 0.48 | +0.8 | |
1,908,531 | - | AZOBR_RS09130 | 0.56 | -0.2 | |
1,908,645 | - | AZOBR_RS09130 | 0.68 | -0.0 | |
1,908,720 | - | -0.5 | |||
1,908,729 | - | AZOBR_RS09130 | 0.77 | -0.1 | |
1,909,015 | + | AZOBR_RS09135 | 0.23 | -0.7 | |
1,909,040 | - | AZOBR_RS09135 | 0.28 | -1.7 | |
1,909,045 | + | AZOBR_RS09135 | 0.29 | -0.3 | |
1,909,046 | - | AZOBR_RS09135 | 0.30 | -0.7 | |
1,909,046 | - | AZOBR_RS09135 | 0.30 | -0.5 | |
1,909,150 | + | AZOBR_RS09135 | 0.53 | -0.1 | |
1,909,151 | - | AZOBR_RS09135 | 0.54 | -0.1 | |
1,909,151 | - | AZOBR_RS09135 | 0.54 | -1.7 | |
1,909,159 | + | AZOBR_RS09135 | 0.55 | -0.8 | |
1,909,159 | + | AZOBR_RS09135 | 0.55 | -0.2 | |
1,909,396 | - | +0.4 | |||
1,909,472 | + | -0.1 |
Or see this region's nucleotide sequence