Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08200 and AZOBR_RS08205 are separated by 133 nucleotides AZOBR_RS08205 and AZOBR_RS08210 are separated by 31 nucleotides
AZOBR_RS08200: AZOBR_RS08200 - serine protease, at 1,727,612 to 1,729,147
_RS08200
AZOBR_RS08205: AZOBR_RS08205 - glycosyl transferase, at 1,729,281 to 1,730,009
_RS08205
AZOBR_RS08210: AZOBR_RS08210 - lipid A biosynthesis, at 1,730,041 to 1,730,376
_RS08210
Position (kb)
1727
1728
1729
1730 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1726.909 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.104 kb on - strand at 1727.273 kb on + strand at 1727.274 kb on - strand at 1727.341 kb on + strand at 1727.341 kb on + strand at 1727.342 kb on - strand at 1727.342 kb on - strand at 1727.375 kb on + strand at 1728.285 kb on - strand, within AZOBR_RS08200 at 1728.293 kb on + strand, within AZOBR_RS08200 at 1728.294 kb on - strand, within AZOBR_RS08200 at 1728.386 kb on + strand, within AZOBR_RS08200 at 1728.386 kb on + strand, within AZOBR_RS08200 at 1728.386 kb on + strand, within AZOBR_RS08200 at 1728.387 kb on - strand, within AZOBR_RS08200 at 1729.112 kb on + strand at 1729.113 kb on - strand at 1729.216 kb on - strand at 1729.258 kb on + strand at 1729.401 kb on + strand, within AZOBR_RS08205 at 1729.401 kb on + strand, within AZOBR_RS08205 at 1729.402 kb on - strand, within AZOBR_RS08205 at 1729.402 kb on - strand, within AZOBR_RS08205 at 1729.402 kb on - strand at 1729.402 kb on - strand, within AZOBR_RS08205 at 1729.402 kb on - strand, within AZOBR_RS08205 at 1729.402 kb on - strand, within AZOBR_RS08205 at 1729.863 kb on + strand, within AZOBR_RS08205 at 1729.863 kb on + strand, within AZOBR_RS08205 at 1729.863 kb on + strand, within AZOBR_RS08205 at 1729.863 kb on + strand, within AZOBR_RS08205 at 1729.863 kb on + strand at 1729.864 kb on - strand, within AZOBR_RS08205 at 1729.864 kb on - strand at 1729.960 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 1,726,909 + +2.6 1,727,064 + +0.7 1,727,064 + -0.5 1,727,064 + +0.9 1,727,064 + -2.5 1,727,104 - -0.6 1,727,273 + +0.4 1,727,274 - -0.1 1,727,341 + +0.5 1,727,341 + +0.3 1,727,342 - -1.2 1,727,342 - +1.2 1,727,375 + +0.3 1,728,285 - AZOBR_RS08200 0.44 +0.2 1,728,293 + AZOBR_RS08200 0.44 +0.2 1,728,294 - AZOBR_RS08200 0.44 +0.3 1,728,386 + AZOBR_RS08200 0.50 +0.7 1,728,386 + AZOBR_RS08200 0.50 +0.8 1,728,386 + AZOBR_RS08200 0.50 +0.1 1,728,387 - AZOBR_RS08200 0.50 +0.6 1,729,112 + +0.3 1,729,113 - +0.1 1,729,216 - -0.5 1,729,258 + +0.5 1,729,401 + AZOBR_RS08205 0.16 -0.5 1,729,401 + AZOBR_RS08205 0.16 -3.1 1,729,402 - AZOBR_RS08205 0.17 -3.3 1,729,402 - AZOBR_RS08205 0.17 -1.1 1,729,402 - -0.1 1,729,402 - AZOBR_RS08205 0.17 -0.1 1,729,402 - AZOBR_RS08205 0.17 -1.1 1,729,402 - AZOBR_RS08205 0.17 +1.2 1,729,863 + AZOBR_RS08205 0.80 -2.2 1,729,863 + AZOBR_RS08205 0.80 -2.0 1,729,863 + AZOBR_RS08205 0.80 -0.1 1,729,863 + AZOBR_RS08205 0.80 -1.9 1,729,863 + -0.5 1,729,864 - AZOBR_RS08205 0.80 -2.0 1,729,864 - -0.1 1,729,960 - -1.5
Or see this region's nucleotide sequence