Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08185 and AZOBR_RS08190 are separated by 39 nucleotides AZOBR_RS08190 and AZOBR_RS08195 are separated by 229 nucleotides
AZOBR_RS08185: AZOBR_RS08185 - PhoU family transcriptional regulator, at 1,725,042 to 1,725,752
_RS08185
AZOBR_RS08190: AZOBR_RS08190 - putative conserved cation transport regulator, at 1,725,792 to 1,726,016
_RS08190
AZOBR_RS08195: AZOBR_RS08195 - hypothetical protein, at 1,726,246 to 1,726,488
_RS08195
Position (kb)
1726
1727 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1725.465 kb on + strand, within AZOBR_RS08185 at 1725.466 kb on - strand, within AZOBR_RS08185 at 1725.531 kb on + strand, within AZOBR_RS08185 at 1725.531 kb on + strand, within AZOBR_RS08185 at 1725.532 kb on - strand, within AZOBR_RS08185 at 1725.561 kb on + strand, within AZOBR_RS08185 at 1725.561 kb on + strand, within AZOBR_RS08185 at 1725.561 kb on + strand, within AZOBR_RS08185 at 1725.562 kb on - strand, within AZOBR_RS08185 at 1725.562 kb on - strand, within AZOBR_RS08185 at 1725.672 kb on + strand, within AZOBR_RS08185 at 1725.672 kb on + strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.673 kb on - strand, within AZOBR_RS08185 at 1725.729 kb on + strand at 1725.729 kb on + strand at 1725.729 kb on + strand at 1725.730 kb on - strand at 1725.750 kb on + strand at 1725.750 kb on + strand at 1725.751 kb on - strand at 1725.830 kb on - strand, within AZOBR_RS08190 at 1725.860 kb on + strand, within AZOBR_RS08190 at 1725.861 kb on - strand, within AZOBR_RS08190 at 1725.861 kb on - strand, within AZOBR_RS08190 at 1726.034 kb on + strand at 1726.035 kb on - strand at 1726.054 kb on + strand at 1726.057 kb on + strand at 1726.057 kb on + strand at 1726.057 kb on + strand at 1726.057 kb on + strand at 1726.058 kb on - strand at 1726.058 kb on - strand at 1726.058 kb on - strand at 1726.111 kb on - strand at 1726.239 kb on - strand at 1726.909 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.064 kb on + strand at 1727.104 kb on - strand at 1727.273 kb on + strand at 1727.274 kb on - strand at 1727.341 kb on + strand at 1727.341 kb on + strand at 1727.342 kb on - strand at 1727.342 kb on - strand at 1727.375 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 1,725,465 + AZOBR_RS08185 0.59 -0.1 1,725,466 - AZOBR_RS08185 0.60 +0.2 1,725,531 + AZOBR_RS08185 0.69 -0.0 1,725,531 + AZOBR_RS08185 0.69 +0.0 1,725,532 - AZOBR_RS08185 0.69 +0.1 1,725,561 + AZOBR_RS08185 0.73 +0.1 1,725,561 + AZOBR_RS08185 0.73 +0.2 1,725,561 + AZOBR_RS08185 0.73 -0.1 1,725,562 - AZOBR_RS08185 0.73 +0.5 1,725,562 - AZOBR_RS08185 0.73 -1.3 1,725,672 + AZOBR_RS08185 0.89 +0.4 1,725,672 + AZOBR_RS08185 0.89 +0.5 1,725,673 - AZOBR_RS08185 0.89 +0.1 1,725,673 - AZOBR_RS08185 0.89 +0.2 1,725,673 - AZOBR_RS08185 0.89 -0.5 1,725,673 - AZOBR_RS08185 0.89 +0.4 1,725,729 + -0.0 1,725,729 + -1.8 1,725,729 + +1.1 1,725,730 - +0.2 1,725,750 + -0.1 1,725,750 + +0.3 1,725,751 - -0.4 1,725,830 - AZOBR_RS08190 0.17 -1.5 1,725,860 + AZOBR_RS08190 0.30 +0.2 1,725,861 - AZOBR_RS08190 0.31 +0.7 1,725,861 - AZOBR_RS08190 0.31 -0.3 1,726,034 + +0.8 1,726,035 - -1.6 1,726,054 + +0.0 1,726,057 + +0.9 1,726,057 + -0.0 1,726,057 + +0.0 1,726,057 + +0.4 1,726,058 - -1.3 1,726,058 - -0.2 1,726,058 - +0.2 1,726,111 - -0.1 1,726,239 - +0.7 1,726,909 + +2.6 1,727,064 + +0.7 1,727,064 + -0.5 1,727,064 + +0.9 1,727,064 + -2.5 1,727,104 - -0.6 1,727,273 + +0.4 1,727,274 - -0.1 1,727,341 + +0.5 1,727,341 + +0.3 1,727,342 - -1.2 1,727,342 - +1.2 1,727,375 + +0.3
Or see this region's nucleotide sequence