Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03820 and AZOBR_RS03825 are separated by 29 nucleotides AZOBR_RS03825 and AZOBR_RS03830 are separated by 93 nucleotides
AZOBR_RS03820: AZOBR_RS03820 - microcin C ABC transporter permease YejB, at 805,221 to 806,330
_RS03820
AZOBR_RS03825: AZOBR_RS03825 - hypothetical protein, at 806,360 to 808,246
_RS03825
AZOBR_RS03830: AZOBR_RS03830 - ABC transporter substrate-binding protein, at 808,340 to 810,178
_RS03830
Position (kb) 806
807
808
809 Strain fitness (log2 ratio) -2
-1
0
1 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.546 kb on + strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.547 kb on - strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.651 kb on + strand, within AZOBR_RS03820 at 805.652 kb on - strand, within AZOBR_RS03820 at 805.880 kb on - strand, within AZOBR_RS03820 at 805.967 kb on - strand, within AZOBR_RS03820 at 805.994 kb on - strand, within AZOBR_RS03820 at 805.994 kb on - strand, within AZOBR_RS03820 at 806.320 kb on + strand at 806.320 kb on + strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.321 kb on - strand at 806.445 kb on + strand at 806.485 kb on - strand at 806.526 kb on + strand at 806.526 kb on + strand at 806.527 kb on - strand at 806.527 kb on - strand at 807.156 kb on + strand, within AZOBR_RS03825 at 807.156 kb on + strand, within AZOBR_RS03825 at 807.157 kb on - strand, within AZOBR_RS03825 at 807.195 kb on + strand, within AZOBR_RS03825 at 807.426 kb on + strand, within AZOBR_RS03825 at 807.426 kb on + strand, within AZOBR_RS03825 at 807.742 kb on - strand, within AZOBR_RS03825 at 807.744 kb on + strand, within AZOBR_RS03825 at 807.744 kb on + strand, within AZOBR_RS03825 at 807.744 kb on + strand, within AZOBR_RS03825 at 807.745 kb on - strand, within AZOBR_RS03825 at 808.071 kb on + strand at 808.071 kb on + strand at 808.200 kb on + strand at 808.201 kb on - strand at 808.201 kb on - strand at 808.201 kb on - strand at 808.262 kb on + strand at 808.262 kb on + strand at 808.262 kb on + strand at 808.321 kb on + strand at 808.322 kb on - strand at 808.395 kb on + strand at 808.395 kb on + strand at 808.396 kb on - strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.476 kb on + strand at 808.477 kb on - strand at 808.477 kb on - strand at 808.596 kb on + strand, within AZOBR_RS03830 at 808.596 kb on + strand, within AZOBR_RS03830 at 808.638 kb on + strand at 808.788 kb on + strand, within AZOBR_RS03830 at 808.788 kb on + strand, within AZOBR_RS03830 at 808.788 kb on + strand, within AZOBR_RS03830 at 808.789 kb on - strand, within AZOBR_RS03830 at 808.789 kb on - strand, within AZOBR_RS03830 at 809.107 kb on - strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830 at 809.145 kb on + strand, within AZOBR_RS03830
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 805,546 + AZOBR_RS03820 0.29 -0.2 805,546 + AZOBR_RS03820 0.29 -0.2 805,546 + AZOBR_RS03820 0.29 -0.9 805,547 - AZOBR_RS03820 0.29 -1.4 805,547 - AZOBR_RS03820 0.29 -1.1 805,547 - AZOBR_RS03820 0.29 -0.2 805,547 - AZOBR_RS03820 0.29 -0.9 805,547 - AZOBR_RS03820 0.29 -0.3 805,651 + AZOBR_RS03820 0.39 -0.8 805,651 + AZOBR_RS03820 0.39 -1.4 805,651 + AZOBR_RS03820 0.39 -1.5 805,651 + AZOBR_RS03820 0.39 -1.2 805,652 - AZOBR_RS03820 0.39 -1.4 805,880 - AZOBR_RS03820 0.59 -0.8 805,967 - AZOBR_RS03820 0.67 -0.3 805,994 - AZOBR_RS03820 0.70 +0.0 805,994 - AZOBR_RS03820 0.70 -0.7 806,320 + +0.4 806,320 + -0.7 806,321 - -1.0 806,321 - -0.8 806,321 - +0.4 806,321 - -1.7 806,445 + -1.2 806,485 - +0.5 806,526 + -1.6 806,526 + -1.1 806,527 - +0.1 806,527 - -0.6 807,156 + AZOBR_RS03825 0.42 -2.3 807,156 + AZOBR_RS03825 0.42 -0.9 807,157 - AZOBR_RS03825 0.42 -0.1 807,195 + AZOBR_RS03825 0.44 -0.4 807,426 + AZOBR_RS03825 0.56 -0.9 807,426 + AZOBR_RS03825 0.56 -2.1 807,742 - AZOBR_RS03825 0.73 -0.1 807,744 + AZOBR_RS03825 0.73 +0.6 807,744 + AZOBR_RS03825 0.73 -0.7 807,744 + AZOBR_RS03825 0.73 -0.4 807,745 - AZOBR_RS03825 0.73 -0.2 808,071 + -0.7 808,071 + -0.3 808,200 + -0.9 808,201 - -0.5 808,201 - -0.2 808,201 - -0.2 808,262 + -1.0 808,262 + -0.3 808,262 + -0.6 808,321 + -0.0 808,322 - -0.4 808,395 + +0.3 808,395 + -0.3 808,396 - +0.0 808,476 + -0.3 808,476 + +0.9 808,476 + +0.9 808,476 + -0.3 808,476 + -0.2 808,476 + +0.1 808,477 - -0.9 808,477 - +0.1 808,596 + AZOBR_RS03830 0.14 -0.6 808,596 + AZOBR_RS03830 0.14 -1.9 808,638 + +1.0 808,788 + AZOBR_RS03830 0.24 +0.4 808,788 + AZOBR_RS03830 0.24 +0.4 808,788 + AZOBR_RS03830 0.24 -0.5 808,789 - AZOBR_RS03830 0.24 +1.3 808,789 - AZOBR_RS03830 0.24 -0.3 809,107 - AZOBR_RS03830 0.42 +0.4 809,145 + AZOBR_RS03830 0.44 -0.1 809,145 + AZOBR_RS03830 0.44 -0.4 809,145 + AZOBR_RS03830 0.44 -0.8 809,145 + AZOBR_RS03830 0.44 -0.0 809,145 + AZOBR_RS03830 0.44 +0.7
Or see this region's nucleotide sequence