Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01360 and AZOBR_RS01365 are separated by 0 nucleotides AZOBR_RS01365 and AZOBR_RS01370 are separated by 125 nucleotides
AZOBR_RS01360: AZOBR_RS01360 - lysine 2 3-aminomutase, at 282,553 to 283,587
_RS01360
AZOBR_RS01365: AZOBR_RS01365 - membrane protein, at 283,588 to 284,142
_RS01365
AZOBR_RS01370: AZOBR_RS01370 - metallopeptidase, at 284,268 to 285,161
_RS01370
Position (kb) 283
284
285 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 282.644 kb on - strand at 282.664 kb on + strand, within AZOBR_RS01360 at 282.709 kb on + strand, within AZOBR_RS01360 at 282.718 kb on + strand, within AZOBR_RS01360 at 282.743 kb on - strand, within AZOBR_RS01360 at 282.946 kb on + strand, within AZOBR_RS01360 at 282.947 kb on - strand, within AZOBR_RS01360 at 283.342 kb on + strand, within AZOBR_RS01360 at 283.343 kb on - strand, within AZOBR_RS01360 at 283.462 kb on + strand, within AZOBR_RS01360 at 283.463 kb on - strand at 283.463 kb on - strand, within AZOBR_RS01360 at 283.763 kb on + strand, within AZOBR_RS01365 at 283.763 kb on + strand, within AZOBR_RS01365 at 283.812 kb on - strand, within AZOBR_RS01365 at 283.832 kb on + strand, within AZOBR_RS01365 at 283.832 kb on + strand, within AZOBR_RS01365 at 283.832 kb on + strand, within AZOBR_RS01365 at 283.833 kb on - strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.033 kb on + strand, within AZOBR_RS01365 at 284.034 kb on - strand, within AZOBR_RS01365 at 284.034 kb on - strand, within AZOBR_RS01365 at 284.034 kb on - strand, within AZOBR_RS01365 at 284.076 kb on - strand, within AZOBR_RS01365 at 284.482 kb on - strand, within AZOBR_RS01370 at 284.601 kb on + strand, within AZOBR_RS01370 at 284.601 kb on + strand, within AZOBR_RS01370 at 284.683 kb on - strand, within AZOBR_RS01370 at 284.683 kb on - strand, within AZOBR_RS01370 at 284.683 kb on - strand, within AZOBR_RS01370 at 284.706 kb on + strand, within AZOBR_RS01370 at 284.706 kb on + strand, within AZOBR_RS01370 at 284.706 kb on + strand, within AZOBR_RS01370 at 284.707 kb on - strand, within AZOBR_RS01370 at 284.707 kb on - strand, within AZOBR_RS01370 at 284.707 kb on - strand, within AZOBR_RS01370 at 284.775 kb on + strand, within AZOBR_RS01370 at 284.775 kb on + strand, within AZOBR_RS01370 at 284.775 kb on + strand, within AZOBR_RS01370 at 284.775 kb on + strand, within AZOBR_RS01370 at 284.775 kb on + strand, within AZOBR_RS01370 at 284.775 kb on + strand, within AZOBR_RS01370 at 284.776 kb on - strand, within AZOBR_RS01370 at 284.776 kb on - strand, within AZOBR_RS01370 at 284.776 kb on - strand, within AZOBR_RS01370 at 284.776 kb on - strand, within AZOBR_RS01370 at 284.776 kb on - strand, within AZOBR_RS01370
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 282,644 - -1.2 282,664 + AZOBR_RS01360 0.11 -3.0 282,709 + AZOBR_RS01360 0.15 -1.2 282,718 + AZOBR_RS01360 0.16 -3.3 282,743 - AZOBR_RS01360 0.18 -1.5 282,946 + AZOBR_RS01360 0.38 -2.9 282,947 - AZOBR_RS01360 0.38 -1.7 283,342 + AZOBR_RS01360 0.76 -2.1 283,343 - AZOBR_RS01360 0.76 -4.0 283,462 + AZOBR_RS01360 0.88 -2.1 283,463 - -1.2 283,463 - AZOBR_RS01360 0.88 -2.7 283,763 + AZOBR_RS01365 0.32 -0.1 283,763 + AZOBR_RS01365 0.32 -0.8 283,812 - AZOBR_RS01365 0.40 -0.2 283,832 + AZOBR_RS01365 0.44 +0.3 283,832 + AZOBR_RS01365 0.44 -1.3 283,832 + AZOBR_RS01365 0.44 +0.6 283,833 - AZOBR_RS01365 0.44 -0.3 284,033 + AZOBR_RS01365 0.80 -0.6 284,033 + AZOBR_RS01365 0.80 +0.5 284,033 + AZOBR_RS01365 0.80 +0.9 284,033 + AZOBR_RS01365 0.80 +0.6 284,034 - AZOBR_RS01365 0.80 -1.0 284,034 - AZOBR_RS01365 0.80 -0.1 284,034 - AZOBR_RS01365 0.80 +0.1 284,076 - AZOBR_RS01365 0.88 -0.6 284,482 - AZOBR_RS01370 0.24 +0.6 284,601 + AZOBR_RS01370 0.37 -2.8 284,601 + AZOBR_RS01370 0.37 -0.6 284,683 - AZOBR_RS01370 0.46 -0.8 284,683 - AZOBR_RS01370 0.46 -0.6 284,683 - AZOBR_RS01370 0.46 +0.1 284,706 + AZOBR_RS01370 0.49 -0.3 284,706 + AZOBR_RS01370 0.49 +0.1 284,706 + AZOBR_RS01370 0.49 +0.8 284,707 - AZOBR_RS01370 0.49 +0.0 284,707 - AZOBR_RS01370 0.49 -1.1 284,707 - AZOBR_RS01370 0.49 +0.8 284,775 + AZOBR_RS01370 0.57 +0.7 284,775 + AZOBR_RS01370 0.57 +0.3 284,775 + AZOBR_RS01370 0.57 -0.1 284,775 + AZOBR_RS01370 0.57 -0.2 284,775 + AZOBR_RS01370 0.57 +0.4 284,775 + AZOBR_RS01370 0.57 +0.1 284,776 - AZOBR_RS01370 0.57 +1.0 284,776 - AZOBR_RS01370 0.57 +0.5 284,776 - AZOBR_RS01370 0.57 -0.4 284,776 - AZOBR_RS01370 0.57 -1.1 284,776 - AZOBR_RS01370 0.57 +0.8
Or see this region's nucleotide sequence