Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01235 and AZOBR_RS01240 are separated by 6 nucleotides AZOBR_RS01240 and AZOBR_RS01245 are separated by 179 nucleotides
AZOBR_RS01235: AZOBR_RS01235 - putative Copper resistance protein; putative fusion protein containing a copC-like domain (N-ter) and a copD-like domain (C-ter), at 252,866 to 254,485
_RS01235
AZOBR_RS01240: AZOBR_RS01240 - ABC transporter ATP-binding protein, at 254,492 to 255,553
_RS01240
AZOBR_RS01245: AZOBR_RS01245 - spermidine/putrescine ABC transporter substrate-binding protein, at 255,733 to 256,833
_RS01245
Position (kb) 254
255
256 Strain fitness (log2 ratio) -2
-1
0
1
2 at 253.920 kb on - strand, within AZOBR_RS01235 at 254.494 kb on - strand at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.986 kb on - strand, within AZOBR_RS01240 at 254.986 kb on - strand, within AZOBR_RS01240 at 254.986 kb on - strand, within AZOBR_RS01240 at 255.553 kb on + strand at 255.553 kb on + strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.587 kb on - strand at 255.780 kb on - strand at 255.780 kb on - strand at 255.780 kb on - strand at 255.780 kb on - strand at 255.920 kb on + strand, within AZOBR_RS01245 at 255.920 kb on + strand, within AZOBR_RS01245 at 255.920 kb on + strand, within AZOBR_RS01245 at 255.921 kb on - strand, within AZOBR_RS01245 at 255.944 kb on + strand, within AZOBR_RS01245 at 255.945 kb on - strand, within AZOBR_RS01245 at 255.945 kb on - strand, within AZOBR_RS01245 at 255.965 kb on + strand, within AZOBR_RS01245 at 255.965 kb on + strand, within AZOBR_RS01245 at 255.965 kb on + strand, within AZOBR_RS01245 at 255.966 kb on - strand, within AZOBR_RS01245 at 255.966 kb on - strand, within AZOBR_RS01245 at 256.365 kb on - strand, within AZOBR_RS01245 at 256.365 kb on - strand, within AZOBR_RS01245 at 256.379 kb on + strand, within AZOBR_RS01245 at 256.379 kb on + strand, within AZOBR_RS01245 at 256.380 kb on - strand, within AZOBR_RS01245
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 253,920 - AZOBR_RS01235 0.65 -0.2 254,494 - -0.4 254,886 + AZOBR_RS01240 0.37 +0.4 254,886 + AZOBR_RS01240 0.37 -0.0 254,886 + AZOBR_RS01240 0.37 -0.4 254,886 + AZOBR_RS01240 0.37 -0.6 254,886 + AZOBR_RS01240 0.37 -2.3 254,886 + AZOBR_RS01240 0.37 -0.2 254,887 - AZOBR_RS01240 0.37 -0.5 254,887 - AZOBR_RS01240 0.37 -0.1 254,887 - AZOBR_RS01240 0.37 -1.0 254,887 - AZOBR_RS01240 0.37 +0.7 254,985 + AZOBR_RS01240 0.46 -1.0 254,985 + AZOBR_RS01240 0.46 -0.1 254,985 + AZOBR_RS01240 0.46 +0.5 254,985 + AZOBR_RS01240 0.46 -0.2 254,985 + AZOBR_RS01240 0.46 +1.1 254,985 + AZOBR_RS01240 0.46 -0.7 254,985 + AZOBR_RS01240 0.46 -0.2 254,986 - AZOBR_RS01240 0.47 -0.2 254,986 - AZOBR_RS01240 0.47 -0.5 254,986 - AZOBR_RS01240 0.47 -0.3 255,553 + -1.0 255,553 + -0.3 255,554 - +1.8 255,554 - +1.7 255,554 - +0.3 255,554 - +0.1 255,554 - -0.7 255,554 - +0.1 255,587 - -0.3 255,780 - +0.2 255,780 - -0.3 255,780 - +0.3 255,780 - -0.1 255,920 + AZOBR_RS01245 0.17 -0.5 255,920 + AZOBR_RS01245 0.17 -0.1 255,920 + AZOBR_RS01245 0.17 +0.0 255,921 - AZOBR_RS01245 0.17 +0.6 255,944 + AZOBR_RS01245 0.19 -2.4 255,945 - AZOBR_RS01245 0.19 -0.0 255,945 - AZOBR_RS01245 0.19 -0.3 255,965 + AZOBR_RS01245 0.21 -1.4 255,965 + AZOBR_RS01245 0.21 -0.6 255,965 + AZOBR_RS01245 0.21 -0.3 255,966 - AZOBR_RS01245 0.21 -1.5 255,966 - AZOBR_RS01245 0.21 -0.3 256,365 - AZOBR_RS01245 0.57 -0.3 256,365 - AZOBR_RS01245 0.57 +0.8 256,379 + AZOBR_RS01245 0.59 +1.0 256,379 + AZOBR_RS01245 0.59 -0.1 256,380 - AZOBR_RS01245 0.59 +0.7
Or see this region's nucleotide sequence