Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005650

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
1,950,754	+		ABIE53_005649	0.42	-0.6
1,950,754	+		ABIE53_005649	0.42	-0.2
1,950,763	+		ABIE53_005649	0.42	-0.1
1,950,763	+		ABIE53_005649	0.42	-1.7
1,950,764	-		ABIE53_005649	0.42	-1.2
1,950,785	+		ABIE53_005649	0.44	+0.6
1,950,845	+		ABIE53_005649	0.47	-0.3
1,950,845	+		ABIE53_005649	0.47	-0.8
1,950,845	+		ABIE53_005649	0.47	+0.1
1,950,845	+		ABIE53_005649	0.47	-0.1
1,950,846	-		ABIE53_005649	0.48	+0.1
1,950,846	-		ABIE53_005649	0.48	-0.4
1,950,846	-		ABIE53_005649	0.48	+3.8
1,950,846	-		ABIE53_005649	0.48	-1.2
1,950,846	-		ABIE53_005649	0.48	-0.8
1,950,917	+		ABIE53_005649	0.52	-2.3
1,950,917	+		ABIE53_005649	0.52	+0.8
1,950,918	-		ABIE53_005649	0.52	-0.4
1,950,918	-		ABIE53_005649	0.52	-0.9
1,950,918	-		ABIE53_005649	0.52	-1.4
1,950,970	+		ABIE53_005649	0.55	-0.5
1,950,971	-		ABIE53_005649	0.55	-0.9
1,950,984	+		ABIE53_005649	0.56	+0.9
1,950,984	+		ABIE53_005649	0.56	-0.7
1,950,984	+		ABIE53_005649	0.56	-1.7
1,950,985	-		ABIE53_005649	0.56	-2.1
1,950,985	-		ABIE53_005649	0.56	+0.0
1,950,985	-		ABIE53_005649	0.56	-0.1
1,950,985	-		ABIE53_005649	0.56	+1.5
1,950,985	-		ABIE53_005649	0.56	-0.7
1,950,985	-		ABIE53_005649	0.56	-0.3
1,950,998	-		ABIE53_005649	0.57	+1.4
1,951,101	-		ABIE53_005649	0.64	+0.1
1,951,245	+		ABIE53_005649	0.73	-0.8
1,951,246	-		ABIE53_005649	0.73	+1.9
1,951,246	-		ABIE53_005649	0.73	+0.8
1,951,246	-		ABIE53_005649	0.73	+0.5
1,951,246	-		ABIE53_005649	0.73	-1.8
1,951,322	+		ABIE53_005649	0.77	-1.5
1,951,323	-		ABIE53_005649	0.77	+0.8
1,951,346	+		ABIE53_005649	0.79	-2.9
1,951,347	-		ABIE53_005649	0.79	-0.9
1,951,347	-		ABIE53_005649	0.79	-0.4
1,951,369	+		ABIE53_005649	0.80	+0.8
1,951,370	-		ABIE53_005649	0.80	+0.4
1,951,370	-		ABIE53_005649	0.80	-0.3
1,951,370	-		ABIE53_005649	0.80	+0.1
1,951,398	+		ABIE53_005649	0.82	+4.1
1,951,399	-		ABIE53_005649	0.82	+1.4
1,951,411	+		ABIE53_005649	0.83	+0.2
1,951,465	+		ABIE53_005649	0.86	+1.0
1,951,466	-		ABIE53_005649	0.86	-0.3
1,951,466	-		ABIE53_005649	0.86	+0.1
1,951,513	+		ABIE53_005649	0.89	-0.0
1,951,513	+		ABIE53_005649	0.89	-1.2
1,951,514	-		ABIE53_005649	0.89	-0.3
1,951,661	-				+0.8
1,951,661	-				-1.1
1,951,665	+				+0.1
1,951,665	+				-0.2
1,951,665	+				+0.1
1,951,665	+				+0.4
1,951,665	+				+1.2
1,951,666	-				-0.9
1,951,666	-				+0.1
1,951,685	-				+0.1
1,951,815	+				-1.0
1,951,816	-				+0.4
1,951,816	-				-1.0
1,951,881	-				-1.0
1,951,891	+				+3.2
1,951,891	+				+0.8
1,951,891	+				-0.2
1,951,891	+				+0.7
1,951,892	-				+2.0
1,951,892	-				-1.2
1,951,892	-				+2.1
1,951,892	-				+0.2
1,951,893	+				+0.1
1,951,902	+		ABIE53_005650	0.11	+0.4
1,951,903	-		ABIE53_005650	0.11	-0.6
1,951,903	-		ABIE53_005650	0.11	-0.9
1,951,906	+		ABIE53_005650	0.11	-1.9
1,951,906	+		ABIE53_005650	0.11	+0.2
1,951,906	+		ABIE53_005650	0.11	+0.8
1,951,907	-		ABIE53_005650	0.11	+1.1
1,951,907	-		ABIE53_005650	0.11	-1.0
1,951,907	-		ABIE53_005650	0.11	+0.0
1,951,907	-		ABIE53_005650	0.11	+0.1
1,951,910	+		ABIE53_005650	0.11	-0.0
1,951,911	-		ABIE53_005650	0.11	-1.1
1,951,945	+		ABIE53_005650	0.13	-1.1
1,951,945	+		ABIE53_005650	0.13	-0.3
1,951,946	-		ABIE53_005650	0.14	-0.8
1,951,996	-		ABIE53_005650	0.17	-0.2
1,951,996	-		ABIE53_005650	0.17	-2.0
1,951,998	-		ABIE53_005650	0.17	-0.9
1,951,999	+		ABIE53_005650	0.17	-0.6
1,951,999	+		ABIE53_005650	0.17	-2.1
1,951,999	+		ABIE53_005650	0.17	-1.4
1,951,999	+		ABIE53_005650	0.17	-0.5
1,951,999	+		ABIE53_005650	0.17	+1.0
1,951,999	+		ABIE53_005650	0.17	-0.2
1,951,999	+		ABIE53_005650	0.17	-0.6
1,951,999	+		ABIE53_005650	0.17	-0.7
1,952,000	-		ABIE53_005650	0.17	-1.4
1,952,000	-		ABIE53_005650	0.17	-1.7
1,952,000	-		ABIE53_005650	0.17	-0.2
1,952,000	-		ABIE53_005650	0.17	-0.5
1,952,000	-		ABIE53_005650	0.17	+0.8
1,952,000	-		ABIE53_005650	0.17	+1.0
1,952,000	-		ABIE53_005650	0.17	-0.1
1,952,000	-		ABIE53_005650	0.17	-0.2
1,952,000	-		ABIE53_005650	0.17	-1.5
1,952,000	-		ABIE53_005650	0.17	+1.2
1,952,002	+		ABIE53_005650	0.17	-0.3
1,952,003	-		ABIE53_005650	0.17	+0.1
1,952,003	-		ABIE53_005650	0.17	-0.6
1,952,214	+		ABIE53_005650	0.32	+0.8
1,952,214	+		ABIE53_005650	0.32	-2.1
1,952,214	+		ABIE53_005650	0.32	-1.3
1,952,214	+		ABIE53_005650	0.32	-0.9
1,952,215	-		ABIE53_005650	0.32	-0.2
1,952,215	-		ABIE53_005650	0.32	+1.7
1,952,215	-		ABIE53_005650	0.32	-1.8
1,952,327	-		ABIE53_005650	0.39	+3.7
1,952,518	-		ABIE53_005650	0.52	+1.0
1,952,579	+		ABIE53_005650	0.56	+0.1
1,952,580	-		ABIE53_005650	0.56	-0.1
1,952,580	-		ABIE53_005650	0.56	-0.9
1,952,580	-		ABIE53_005650	0.56	+0.8
1,952,627	+		ABIE53_005650	0.59	-0.3
1,952,627	+		ABIE53_005650	0.59	-0.7
1,952,628	-		ABIE53_005650	0.59	-1.9
1,952,704	+		ABIE53_005650	0.64	-3.3
1,952,889	+		ABIE53_005650	0.77	-1.4
1,952,892	+		ABIE53_005650	0.77	+0.8
1,952,893	-		ABIE53_005650	0.77	+1.2
1,952,893	-		ABIE53_005650	0.77	-0.5
1,952,893	-		ABIE53_005650	0.77	+0.8
1,952,906	+		ABIE53_005650	0.78	-0.1
1,952,906	+		ABIE53_005650	0.78	+0.1
1,952,906	+		ABIE53_005650	0.78	-0.8
1,952,906	+		ABIE53_005650	0.78	-1.3
1,952,906	+		ABIE53_005650	0.78	+1.1
1,952,907	-		ABIE53_005650	0.78	+0.1
1,952,907	-		ABIE53_005650	0.78	-0.4
1,952,907	-		ABIE53_005650	0.78	+1.4
1,952,911	-		ABIE53_005650	0.78	-0.8
1,952,911	-		ABIE53_005650	0.78	+0.8
1,952,911	-		ABIE53_005650	0.78	+0.8
1,953,069	+		ABIE53_005650	0.89	-0.5
1,953,069	+		ABIE53_005650	0.89	-0.2
1,953,070	-		ABIE53_005650	0.89	-1.6
1,953,070	-		ABIE53_005650	0.89	+0.2
1,953,070	-		ABIE53_005650	0.89	-0.6
1,953,154	-				+0.2
1,953,166	+				+2.4
1,953,232	+				+0.8
1,953,232	+				-0.3
1,953,232	+				-0.3
1,953,233	-				-0.1
1,953,233	-				-1.6
1,953,270	+				-0.3
1,953,308	+				-0.5
1,953,309	-				+0.8
1,953,318	-				-0.6
1,953,318	-				-1.0
1,953,333	+				+0.3
1,953,333	+				+1.4
1,953,362	-				+0.5
1,953,362	-				-0.2
1,953,362	-				+0.8
1,953,362	-				-1.3
1,953,383	+				-1.8
1,953,383	+				-0.4
1,953,383	+				+0.4
1,953,438	+				-0.7
1,953,516	+		ABIE53_005651	0.13	-0.6
1,953,560	+		ABIE53_005651	0.19	-0.2
1,953,575	+		ABIE53_005651	0.22	+1.6
1,953,581	+		ABIE53_005651	0.22	-1.6
1,953,581	+		ABIE53_005651	0.22	+1.1
1,953,582	-		ABIE53_005651	0.23	+2.1
1,953,613	+		ABIE53_005651	0.27	+3.4
1,953,614	-		ABIE53_005651	0.27	+0.4
1,953,623	+		ABIE53_005651	0.28	+0.2
1,953,800	+		ABIE53_005651	0.53	-1.8
1,953,828	+		ABIE53_005651	0.57	+3.5
1,953,828	+		ABIE53_005651	0.57	-0.0
1,953,828	+		ABIE53_005651	0.57	-1.0
1,953,828	+		ABIE53_005651	0.57	-1.3
1,953,828	+		ABIE53_005651	0.57	-0.1
1,953,829	-		ABIE53_005651	0.57	+0.8
1,953,829	-		ABIE53_005651	0.57	+0.3
1,953,919	+		ABIE53_005651	0.70	-0.2
1,953,920	-		ABIE53_005651	0.70	-0.9
1,954,010	-		ABIE53_005651	0.83	-0.9
1,954,074	-				-0.9
1,954,082	+				-0.4
1,954,083	-				-1.0
1,954,121	+				-1.3
1,954,121	+				-0.5
1,954,122	-				+0.8
1,954,132	+				-0.2
1,954,182	+				-0.4