Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_004469 and ABIE53_004470 are separated by 42 nucleotides ABIE53_004470 and ABIE53_004471 are separated by 37 nucleotides ABIE53_004471 and ABIE53_004472 overlap by 23 nucleotides
ABIE53_004469: ABIE53_004469 - subfamily B ATP-binding cassette protein HlyB/CyaB, at 658,921 to 661,977
_004469
ABIE53_004470: ABIE53_004470 - parvulin-like peptidyl-prolyl isomerase, at 662,020 to 662,772
_004470
ABIE53_004471: ABIE53_004471 - hemolysin D, at 662,810 to 664,183
_004471
ABIE53_004472: ABIE53_004472 - pSer/pThr/pTyr-binding forkhead associated (FHA) protein, at 664,161 to 666,788
_004472
Position (kb) 662
663
664
665 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 661.859 kb on + strand at 661.859 kb on + strand at 661.877 kb on + strand at 661.922 kb on - strand at 661.922 kb on - strand at 661.922 kb on - strand at 661.922 kb on - strand at 661.977 kb on + strand at 662.248 kb on + strand, within ABIE53_004470 at 662.249 kb on - strand, within ABIE53_004470 at 662.320 kb on - strand, within ABIE53_004470 at 662.383 kb on - strand, within ABIE53_004470 at 662.429 kb on + strand, within ABIE53_004470 at 662.481 kb on - strand, within ABIE53_004470 at 662.671 kb on + strand, within ABIE53_004470 at 662.671 kb on + strand, within ABIE53_004470 at 662.680 kb on + strand, within ABIE53_004470 at 662.761 kb on + strand at 662.762 kb on - strand at 662.910 kb on + strand at 662.910 kb on + strand at 662.964 kb on + strand, within ABIE53_004471 at 663.013 kb on - strand, within ABIE53_004471 at 663.013 kb on - strand, within ABIE53_004471 at 663.321 kb on - strand, within ABIE53_004471 at 663.321 kb on - strand, within ABIE53_004471 at 663.321 kb on - strand, within ABIE53_004471 at 663.438 kb on + strand, within ABIE53_004471 at 663.439 kb on - strand, within ABIE53_004471 at 663.887 kb on + strand, within ABIE53_004471 at 663.888 kb on - strand, within ABIE53_004471 at 663.924 kb on + strand, within ABIE53_004471 at 663.924 kb on + strand, within ABIE53_004471 at 663.924 kb on + strand, within ABIE53_004471 at 663.925 kb on - strand, within ABIE53_004471 at 663.925 kb on - strand, within ABIE53_004471 at 663.925 kb on - strand, within ABIE53_004471 at 663.957 kb on + strand, within ABIE53_004471 at 663.957 kb on + strand, within ABIE53_004471 at 663.957 kb on + strand, within ABIE53_004471 at 663.958 kb on - strand, within ABIE53_004471 at 663.958 kb on - strand, within ABIE53_004471 at 664.010 kb on + strand, within ABIE53_004471 at 664.010 kb on + strand, within ABIE53_004471 at 664.167 kb on + strand at 664.287 kb on + strand at 664.287 kb on + strand at 664.288 kb on - strand at 664.288 kb on - strand at 664.321 kb on + strand at 664.322 kb on - strand at 664.342 kb on + strand at 664.342 kb on + strand at 664.523 kb on + strand, within ABIE53_004472 at 664.702 kb on - strand, within ABIE53_004472 at 664.843 kb on + strand, within ABIE53_004472 at 664.901 kb on + strand, within ABIE53_004472 at 664.902 kb on - strand, within ABIE53_004472 at 664.902 kb on - strand, within ABIE53_004472 at 664.943 kb on - strand, within ABIE53_004472 at 664.943 kb on - strand, within ABIE53_004472 at 665.144 kb on - strand, within ABIE53_004472 at 665.167 kb on + strand, within ABIE53_004472 at 665.168 kb on - strand, within ABIE53_004472 at 665.168 kb on - strand, within ABIE53_004472 at 665.168 kb on - strand, within ABIE53_004472 at 665.168 kb on - strand, within ABIE53_004472 at 665.168 kb on - strand, within ABIE53_004472
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 661,859 + -0.9 661,859 + -2.1 661,877 + -0.9 661,922 - +1.2 661,922 - +2.4 661,922 - +0.2 661,922 - +0.8 661,977 + +1.1 662,248 + ABIE53_004470 0.30 -1.8 662,249 - ABIE53_004470 0.30 -1.2 662,320 - ABIE53_004470 0.40 +0.4 662,383 - ABIE53_004470 0.48 -1.4 662,429 + ABIE53_004470 0.54 +0.0 662,481 - ABIE53_004470 0.61 -0.2 662,671 + ABIE53_004470 0.86 -0.9 662,671 + ABIE53_004470 0.86 +0.1 662,680 + ABIE53_004470 0.88 -0.5 662,761 + +0.8 662,762 - +0.4 662,910 + +1.1 662,910 + -0.2 662,964 + ABIE53_004471 0.11 -2.1 663,013 - ABIE53_004471 0.15 +1.8 663,013 - ABIE53_004471 0.15 -1.0 663,321 - ABIE53_004471 0.37 -0.4 663,321 - ABIE53_004471 0.37 -1.2 663,321 - ABIE53_004471 0.37 -2.1 663,438 + ABIE53_004471 0.46 -1.7 663,439 - ABIE53_004471 0.46 +0.8 663,887 + ABIE53_004471 0.78 -0.8 663,888 - ABIE53_004471 0.78 -0.4 663,924 + ABIE53_004471 0.81 +0.4 663,924 + ABIE53_004471 0.81 +0.4 663,924 + ABIE53_004471 0.81 -0.6 663,925 - ABIE53_004471 0.81 -1.1 663,925 - ABIE53_004471 0.81 +3.4 663,925 - ABIE53_004471 0.81 +0.4 663,957 + ABIE53_004471 0.83 +0.9 663,957 + ABIE53_004471 0.83 -1.7 663,957 + ABIE53_004471 0.83 -0.6 663,958 - ABIE53_004471 0.84 -1.1 663,958 - ABIE53_004471 0.84 +1.1 664,010 + ABIE53_004471 0.87 +0.5 664,010 + ABIE53_004471 0.87 +0.1 664,167 + -0.5 664,287 + -0.2 664,287 + +0.1 664,288 - +0.8 664,288 - +0.8 664,321 + -1.6 664,322 - -0.8 664,342 + -0.6 664,342 + -0.3 664,523 + ABIE53_004472 0.14 +0.8 664,702 - ABIE53_004472 0.21 +0.4 664,843 + ABIE53_004472 0.26 +0.4 664,901 + ABIE53_004472 0.28 -0.4 664,902 - ABIE53_004472 0.28 -0.2 664,902 - ABIE53_004472 0.28 -0.6 664,943 - ABIE53_004472 0.30 +1.7 664,943 - ABIE53_004472 0.30 -0.2 665,144 - ABIE53_004472 0.37 -0.4 665,167 + ABIE53_004472 0.38 +0.1 665,168 - ABIE53_004472 0.38 -0.2 665,168 - ABIE53_004472 0.38 -2.1 665,168 - ABIE53_004472 0.38 -0.3 665,168 - ABIE53_004472 0.38 +1.2 665,168 - ABIE53_004472 0.38 -1.2
Or see this region's nucleotide sequence