Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3477

Experiment: Green bean; epiphytic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Green bean; epiphytic
4,146,917	+		Psyr_3476	0.60	+0.1
4,146,917	+		Psyr_3476	0.60	+0.6
4,146,917	+		Psyr_3476	0.60	+0.3
4,146,918	-		Psyr_3476	0.60	-0.2
4,147,196	+				-1.2
4,147,196	+				+0.5
4,147,246	+				+1.0
4,147,247	-				-0.4
4,147,299	-				-0.1
4,147,459	-				-0.7
4,147,580	+				+0.9
4,147,580	+				-1.1
4,147,580	+				-0.6
4,147,581	-				-0.1
4,147,583	+				+1.1
4,147,583	+				+0.2
4,147,584	-				-0.1
4,147,584	-				-0.3
4,147,584	-				-1.4
4,147,584	-				+0.5
4,147,584	-				+0.8
4,147,584	-				-2.0
4,147,847	-				+1.0
4,147,866	+		Psyr_3477	0.10	-0.4
4,147,866	+		Psyr_3477	0.10	-0.4
4,147,867	-		Psyr_3477	0.10	+1.0
4,147,907	-		Psyr_3477	0.13	+0.2
4,147,972	+		Psyr_3477	0.16	-0.5
4,147,972	+		Psyr_3477	0.16	+0.6
4,147,972	+		Psyr_3477	0.16	+0.2
4,147,973	-		Psyr_3477	0.16	-0.1
4,147,973	-		Psyr_3477	0.16	+0.2
4,148,391	+		Psyr_3477	0.40	-0.6
4,148,391	+		Psyr_3477	0.40	+0.0
4,148,392	-		Psyr_3477	0.40	+1.2
4,148,392	-		Psyr_3477	0.40	+1.0
4,148,454	+		Psyr_3477	0.44	+0.7
4,148,454	+		Psyr_3477	0.44	+0.2
4,148,454	+		Psyr_3477	0.44	-0.2
4,148,454	+		Psyr_3477	0.44	+0.3
4,148,455	-		Psyr_3477	0.44	+0.1
4,148,455	-		Psyr_3477	0.44	-0.4
4,148,455	-		Psyr_3477	0.44	+0.4
4,148,455	-		Psyr_3477	0.44	+0.4
4,148,455	-		Psyr_3477	0.44	+1.2
4,148,455	-		Psyr_3477	0.44	-0.4
4,148,679	+		Psyr_3477	0.57	+0.0
4,148,680	-		Psyr_3477	0.57	+0.4
4,148,730	-		Psyr_3477	0.60	-0.0
4,148,772	+		Psyr_3477	0.62	-0.3
4,148,772	+		Psyr_3477	0.62	+0.0
4,148,772	+		Psyr_3477	0.62	+1.1
4,148,772	+		Psyr_3477	0.62	+0.1
4,148,772	+		Psyr_3477	0.62	+2.1
4,148,772	+		Psyr_3477	0.62	+0.6
4,148,772	+		Psyr_3477	0.62	+0.5
4,148,772	+		Psyr_3477	0.62	+2.2
4,148,772	+		Psyr_3477	0.62	-0.8
4,148,772	+		Psyr_3477	0.62	+1.3
4,148,772	+		Psyr_3477	0.62	+0.5
4,148,772	+		Psyr_3477	0.62	-0.3
4,148,772	+		Psyr_3477	0.62	+0.3
4,148,772	+		Psyr_3477	0.62	+0.0
4,148,772	+		Psyr_3477	0.62	+0.2
4,148,772	+		Psyr_3477	0.62	+0.6
4,148,772	+		Psyr_3477	0.62	+0.9
4,148,772	+		Psyr_3477	0.62	+1.1
4,148,772	+		Psyr_3477	0.62	+0.6
4,148,772	+		Psyr_3477	0.62	-2.0
4,148,772	+		Psyr_3477	0.62	+1.0
4,148,772	+		Psyr_3477	0.62	+1.5
4,148,773	-		Psyr_3477	0.62	+0.1
4,148,773	-		Psyr_3477	0.62	+0.3
4,148,773	-		Psyr_3477	0.62	+0.3
4,148,773	-		Psyr_3477	0.62	-1.0
4,148,773	-		Psyr_3477	0.62	-0.3
4,148,773	-		Psyr_3477	0.62	+0.3
4,148,773	-		Psyr_3477	0.62	+0.3
4,148,773	-		Psyr_3477	0.62	+0.7
4,148,773	-		Psyr_3477	0.62	+0.8
4,148,773	-		Psyr_3477	0.62	-0.4
4,148,773	-		Psyr_3477	0.62	+0.6
4,148,773	-		Psyr_3477	0.62	-2.0
4,148,773	-		Psyr_3477	0.62	+0.4
4,148,773	-		Psyr_3477	0.62	-0.2
4,148,773	-		Psyr_3477	0.62	+0.9
4,148,773	-		Psyr_3477	0.62	-0.8
4,148,773	-		Psyr_3477	0.62	-0.4
4,148,773	-		Psyr_3477	0.62	+0.3
4,148,773	-		Psyr_3477	0.62	-1.0
4,148,773	-		Psyr_3477	0.62	+0.6
4,148,808	+		Psyr_3477	0.64	-0.9
4,148,808	+		Psyr_3477	0.64	+3.6
4,148,808	+		Psyr_3477	0.64	-0.2
4,148,808	+		Psyr_3477	0.64	-0.6
4,148,809	-		Psyr_3477	0.64	-1.4
4,148,809	-		Psyr_3477	0.64	-0.4
4,148,956	+		Psyr_3477	0.72	-0.2
4,148,957	-		Psyr_3477	0.73	+0.2
4,149,002	-		Psyr_3477	0.75	-0.8
4,149,133	+		Psyr_3477	0.83	+1.0
4,149,134	-		Psyr_3477	0.83	+0.8
4,149,135	+		Psyr_3477	0.83	+0.3
4,149,135	+		Psyr_3477	0.83	+1.2
4,149,135	+		Psyr_3477	0.83	+0.6
4,149,136	-		Psyr_3477	0.83	-0.0
4,149,184	+		Psyr_3477	0.86	-0.3
4,149,185	-		Psyr_3477	0.86	-0.4
4,149,191	-		Psyr_3477	0.86	-0.7
4,149,260	+		Psyr_3477	0.90	-0.0
4,149,260	+		Psyr_3477	0.90	-0.0
4,149,309	+				+0.1
4,149,310	-				-0.3
4,149,310	-				-0.8
4,149,310	-				-1.1
4,149,310	-				-0.8
4,149,310	-				-0.4
4,149,311	+				+1.6
4,149,311	+				+1.5
4,149,311	+				+0.2
4,149,311	+				-0.4
4,149,311	+				-0.1
4,149,311	+				-0.6
4,149,311	+				+0.1
4,149,311	+				-0.1
4,149,311	+				-1.2
4,149,312	-				+1.3
4,149,312	-				-1.0
4,149,312	-				-0.1
4,149,312	-				+0.6
4,149,367	+				+0.3
4,149,367	+				-1.7
4,149,410	-				-0.4
4,149,425	-				-0.4
4,149,467	-				-1.0
4,149,477	+				+3.2
4,149,512	+				+0.6
4,149,513	-				+0.2
4,149,546	-				+0.9
4,149,556	+				-0.7
4,149,556	+				-0.5
4,149,557	-				+0.2
4,149,635	+				-1.4
4,149,635	+				-0.0
4,149,635	+				-0.3
4,149,635	+				+0.0
4,149,635	+				-0.4
4,149,636	-				-0.4
4,149,636	-				+0.9
4,149,649	-				+0.2
4,149,701	+				+0.3
4,149,701	+				+1.5
4,149,701	+				+0.0
4,149,701	+				-0.7
4,149,701	+				+1.6
4,149,702	-				-0.2
4,149,702	-				+0.6
4,149,782	+		Psyr_3478	0.11	+0.2
4,149,782	+		Psyr_3478	0.11	+0.1
4,149,782	+		Psyr_3478	0.11	-0.4
4,149,782	+		Psyr_3478	0.11	+0.2
4,149,782	+		Psyr_3478	0.11	+1.3
4,149,935	+		Psyr_3478	0.23	+0.4
4,149,935	+		Psyr_3478	0.23	+0.9
4,149,935	+		Psyr_3478	0.23	+0.4
4,149,935	+		Psyr_3478	0.23	-0.2
4,149,936	-		Psyr_3478	0.23	+2.8
4,149,936	-		Psyr_3478	0.23	+1.8
4,149,936	-		Psyr_3478	0.23	+1.8
4,149,936	-		Psyr_3478	0.23	+0.0
4,149,936	-		Psyr_3478	0.23	+2.6
4,150,104	+		Psyr_3478	0.35	+1.5
4,150,104	+		Psyr_3478	0.35	+1.5
4,150,105	-		Psyr_3478	0.35	+2.1
4,150,105	-		Psyr_3478	0.35	+1.8
4,150,161	+		Psyr_3478	0.40	+1.7
4,150,161	+		Psyr_3478	0.40	+0.6
4,150,162	-		Psyr_3478	0.40	+2.2
4,150,162	-		Psyr_3478	0.40	+0.8
4,150,162	-		Psyr_3478	0.40	+0.3
4,150,197	+		Psyr_3478	0.42	+0.4
4,150,197	+		Psyr_3478	0.42	-0.2
4,150,255	-		Psyr_3478	0.47	+0.1
4,150,313	+		Psyr_3478	0.51	-0.6
4,150,313	+		Psyr_3478	0.51	-0.1
4,150,313	+		Psyr_3478	0.51	-0.0
4,150,313	+		Psyr_3478	0.51	+2.7
4,150,314	-		Psyr_3478	0.51	-1.4
4,150,314	-		Psyr_3478	0.51	-0.3
4,150,314	-		Psyr_3478	0.51	+0.2
4,150,314	-		Psyr_3478	0.51	+0.6
4,150,349	+		Psyr_3478	0.54	-0.0
4,150,350	-		Psyr_3478	0.54	-0.3
4,150,385	+		Psyr_3478	0.57	+1.1
4,150,400	+		Psyr_3478	0.58	+1.1
4,150,400	+		Psyr_3478	0.58	+1.1
4,150,400	+		Psyr_3478	0.58	+0.4
4,150,400	+		Psyr_3478	0.58	-1.7
4,150,400	+		Psyr_3478	0.58	+1.5
4,150,401	-		Psyr_3478	0.58	+2.4
4,150,401	-		Psyr_3478	0.58	+0.9
4,150,401	-		Psyr_3478	0.58	+0.3
4,150,412	+		Psyr_3478	0.59	+0.9
4,150,412	+		Psyr_3478	0.59	+0.3
4,150,412	+		Psyr_3478	0.59	+1.0
4,150,412	+		Psyr_3478	0.59	+0.3
4,150,412	+		Psyr_3478	0.59	+1.3
4,150,412	+		Psyr_3478	0.59	+1.2
4,150,412	+		Psyr_3478	0.59	+0.6
4,150,412	+		Psyr_3478	0.59	+0.6
4,150,412	+		Psyr_3478	0.59	+1.3
4,150,412	+		Psyr_3478	0.59	-0.0
4,150,412	+		Psyr_3478	0.59	+1.1
4,150,413	-		Psyr_3478	0.59	-0.1
4,150,413	-		Psyr_3478	0.59	-0.1
4,150,413	-		Psyr_3478	0.59	+0.0
4,150,413	-		Psyr_3478	0.59	+0.7
4,150,413	-		Psyr_3478	0.59	-0.1
4,150,413	-		Psyr_3478	0.59	+2.2
4,150,413	-		Psyr_3478	0.59	+1.8
4,150,413	-		Psyr_3478	0.59	+1.3
4,150,413	-		Psyr_3478	0.59	+0.5
4,150,413	-		Psyr_3478	0.59	+0.1
4,150,413	-		Psyr_3478	0.59	+0.4
4,150,413	-		Psyr_3478	0.59	-0.2
4,150,416	+		Psyr_3478	0.59	-0.2
4,150,416	+		Psyr_3478	0.59	+0.8
4,150,416	+		Psyr_3478	0.59	+0.8
4,150,417	-		Psyr_3478	0.59	-0.4