Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06196 and H281DRAFT_06197 are separated by 64 nucleotides H281DRAFT_06197 and H281DRAFT_06198 are separated by 241 nucleotides
H281DRAFT_06196: H281DRAFT_06196 - ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module, at 83,924 to 85,891
_06196
H281DRAFT_06197: H281DRAFT_06197 - hypothetical protein, at 85,956 to 86,174
_06197
H281DRAFT_06198: H281DRAFT_06198 - hypothetical protein, at 86,416 to 86,931
_06198
Position (kb)
85
86
87 Strain fitness (log2 ratio)
-2
-1
0
1 at 85.085 kb on + strand, within H281DRAFT_06196 at 85.085 kb on + strand, within H281DRAFT_06196 at 85.085 kb on + strand, within H281DRAFT_06196 at 85.085 kb on + strand, within H281DRAFT_06196 at 85.086 kb on - strand, within H281DRAFT_06196 at 85.088 kb on + strand, within H281DRAFT_06196 at 85.088 kb on + strand, within H281DRAFT_06196 at 85.089 kb on - strand, within H281DRAFT_06196 at 85.126 kb on + strand, within H281DRAFT_06196 at 85.126 kb on + strand, within H281DRAFT_06196 at 85.127 kb on - strand, within H281DRAFT_06196 at 85.127 kb on - strand, within H281DRAFT_06196 at 85.239 kb on + strand, within H281DRAFT_06196 at 85.239 kb on + strand, within H281DRAFT_06196 at 85.261 kb on - strand, within H281DRAFT_06196 at 85.273 kb on + strand, within H281DRAFT_06196 at 85.574 kb on - strand, within H281DRAFT_06196 at 85.574 kb on - strand, within H281DRAFT_06196 at 85.650 kb on - strand, within H281DRAFT_06196 at 85.657 kb on + strand, within H281DRAFT_06196 at 85.783 kb on + strand at 85.832 kb on + strand at 85.887 kb on + strand at 85.887 kb on + strand at 85.887 kb on + strand at 85.888 kb on - strand at 86.152 kb on + strand, within H281DRAFT_06197 at 86.152 kb on + strand, within H281DRAFT_06197 at 86.163 kb on - strand at 86.168 kb on - strand at 86.214 kb on + strand at 86.215 kb on - strand at 86.215 kb on - strand at 86.305 kb on + strand at 86.305 kb on + strand at 86.305 kb on + strand at 86.305 kb on + strand at 86.305 kb on + strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.306 kb on - strand at 86.330 kb on + strand at 86.331 kb on - strand at 86.358 kb on + strand at 86.362 kb on + strand at 86.362 kb on + strand at 86.362 kb on + strand at 86.363 kb on - strand at 86.363 kb on - strand at 86.363 kb on - strand at 86.366 kb on - strand at 86.499 kb on + strand, within H281DRAFT_06198 at 86.500 kb on - strand, within H281DRAFT_06198 at 86.610 kb on + strand, within H281DRAFT_06198 at 86.611 kb on - strand, within H281DRAFT_06198 at 86.613 kb on + strand, within H281DRAFT_06198 at 86.613 kb on + strand, within H281DRAFT_06198 at 86.613 kb on + strand, within H281DRAFT_06198 at 86.614 kb on - strand, within H281DRAFT_06198 at 86.614 kb on - strand, within H281DRAFT_06198 at 86.670 kb on - strand, within H281DRAFT_06198 at 86.803 kb on + strand, within H281DRAFT_06198 at 86.948 kb on - strand at 86.968 kb on + strand at 86.968 kb on + strand at 86.968 kb on + strand at 86.969 kb on - strand at 86.973 kb on + strand at 86.973 kb on + strand at 86.973 kb on + strand at 86.974 kb on - strand at 86.980 kb on - strand at 86.980 kb on - strand at 86.980 kb on - strand at 86.984 kb on + strand at 86.994 kb on - strand at 86.994 kb on - strand at 87.018 kb on - strand at 87.110 kb on + strand at 87.111 kb on - strand at 87.123 kb on - strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.124 kb on + strand at 87.125 kb on - strand at 87.125 kb on - strand at 87.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 85,085 + H281DRAFT_06196 0.59 +0.1 85,085 + H281DRAFT_06196 0.59 -0.9 85,085 + H281DRAFT_06196 0.59 -0.2 85,085 + H281DRAFT_06196 0.59 -0.2 85,086 - H281DRAFT_06196 0.59 -0.5 85,088 + H281DRAFT_06196 0.59 +0.3 85,088 + H281DRAFT_06196 0.59 -1.2 85,089 - H281DRAFT_06196 0.59 -0.3 85,126 + H281DRAFT_06196 0.61 +0.0 85,126 + H281DRAFT_06196 0.61 +0.9 85,127 - H281DRAFT_06196 0.61 +0.4 85,127 - H281DRAFT_06196 0.61 -0.2 85,239 + H281DRAFT_06196 0.67 -1.0 85,239 + H281DRAFT_06196 0.67 -0.2 85,261 - H281DRAFT_06196 0.68 -1.1 85,273 + H281DRAFT_06196 0.69 +0.7 85,574 - H281DRAFT_06196 0.84 -0.2 85,574 - H281DRAFT_06196 0.84 +0.1 85,650 - H281DRAFT_06196 0.88 -0.3 85,657 + H281DRAFT_06196 0.88 -1.4 85,783 + +0.4 85,832 + -0.9 85,887 + -0.1 85,887 + +0.7 85,887 + -0.1 85,888 - +0.4 86,152 + H281DRAFT_06197 0.89 +0.8 86,152 + H281DRAFT_06197 0.89 +0.6 86,163 - -0.4 86,168 - +0.2 86,214 + -0.2 86,215 - +0.0 86,215 - +1.7 86,305 + -0.8 86,305 + +0.1 86,305 + -0.6 86,305 + +0.5 86,305 + +0.3 86,306 - -0.1 86,306 - -0.7 86,306 - -0.7 86,306 - +1.0 86,306 - -0.1 86,306 - -0.1 86,306 - -1.2 86,306 - +1.0 86,306 - +0.8 86,306 - -0.2 86,306 - -0.7 86,330 + +1.5 86,331 - +0.1 86,358 + +0.0 86,362 + +0.1 86,362 + +0.2 86,362 + +0.5 86,363 - -0.2 86,363 - +0.1 86,363 - -0.0 86,366 - -1.0 86,499 + H281DRAFT_06198 0.16 -0.3 86,500 - H281DRAFT_06198 0.16 +0.6 86,610 + H281DRAFT_06198 0.38 +0.1 86,611 - H281DRAFT_06198 0.38 -0.4 86,613 + H281DRAFT_06198 0.38 +0.0 86,613 + H281DRAFT_06198 0.38 -0.4 86,613 + H281DRAFT_06198 0.38 +0.1 86,614 - H281DRAFT_06198 0.38 +0.1 86,614 - H281DRAFT_06198 0.38 -0.1 86,670 - H281DRAFT_06198 0.49 -0.0 86,803 + H281DRAFT_06198 0.75 +1.0 86,948 - -0.2 86,968 + +0.4 86,968 + +0.3 86,968 + +0.4 86,969 - -0.2 86,973 + +0.1 86,973 + -0.8 86,973 + +0.6 86,974 - +0.6 86,980 - +0.1 86,980 - +0.7 86,980 - -0.1 86,984 + -0.0 86,994 - +0.3 86,994 - -1.2 87,018 - +0.4 87,110 + -0.1 87,111 - +0.7 87,123 - -1.2 87,124 + -0.6 87,124 + -0.5 87,124 + -0.1 87,124 + -2.6 87,124 + +0.2 87,124 + -1.1 87,124 + -0.1 87,124 + +0.4 87,125 - -0.4 87,125 - -1.2 87,125 - -0.1
Or see this region's nucleotide sequence