Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04491 and H281DRAFT_04492 are separated by 187 nucleotides H281DRAFT_04492 and H281DRAFT_04493 are separated by 234 nucleotides H281DRAFT_04493 and H281DRAFT_04494 are separated by 122 nucleotides
H281DRAFT_04491: H281DRAFT_04491 - electron-transferring-flavoprotein dehydrogenase, at 223,695 to 225,368
_04491
H281DRAFT_04492: H281DRAFT_04492 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 225,556 to 226,332
_04492
H281DRAFT_04493: H281DRAFT_04493 - (3S)-malyl-CoA thioesterase, at 226,567 to 227,010
_04493
H281DRAFT_04494: H281DRAFT_04494 - transcriptional regulator, LuxR family, at 227,133 to 227,678
_04494
Position (kb)
225
226
227 Strain fitness (log2 ratio)
-2
-1
0
1 at 225.476 kb on - strand at 225.481 kb on - strand at 225.525 kb on - strand at 225.530 kb on + strand at 225.531 kb on - strand at 225.531 kb on - strand at 225.531 kb on - strand at 225.535 kb on - strand at 225.889 kb on + strand, within H281DRAFT_04492 at 225.889 kb on + strand at 225.890 kb on - strand, within H281DRAFT_04492 at 225.890 kb on - strand, within H281DRAFT_04492 at 226.000 kb on - strand, within H281DRAFT_04492 at 226.026 kb on - strand, within H281DRAFT_04492 at 226.141 kb on + strand, within H281DRAFT_04492 at 226.141 kb on + strand, within H281DRAFT_04492 at 226.141 kb on + strand, within H281DRAFT_04492 at 226.141 kb on + strand, within H281DRAFT_04492 at 226.142 kb on - strand, within H281DRAFT_04492 at 226.142 kb on - strand, within H281DRAFT_04492 at 226.144 kb on - strand, within H281DRAFT_04492 at 226.257 kb on - strand at 226.479 kb on - strand at 226.548 kb on + strand at 226.549 kb on - strand at 226.549 kb on - strand at 226.654 kb on + strand, within H281DRAFT_04493 at 226.655 kb on - strand, within H281DRAFT_04493 at 226.663 kb on + strand, within H281DRAFT_04493 at 226.680 kb on + strand, within H281DRAFT_04493 at 226.680 kb on + strand, within H281DRAFT_04493 at 226.680 kb on + strand, within H281DRAFT_04493 at 226.681 kb on - strand, within H281DRAFT_04493 at 226.882 kb on + strand, within H281DRAFT_04493 at 226.883 kb on - strand, within H281DRAFT_04493 at 226.883 kb on - strand, within H281DRAFT_04493 at 226.908 kb on - strand, within H281DRAFT_04493 at 226.908 kb on - strand, within H281DRAFT_04493 at 227.009 kb on - strand at 227.022 kb on - strand at 227.059 kb on - strand at 227.178 kb on - strand at 227.183 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 225,476 - +0.3 225,481 - +0.7 225,525 - +0.4 225,530 + -0.3 225,531 - +0.2 225,531 - +0.8 225,531 - +1.0 225,535 - +0.7 225,889 + H281DRAFT_04492 0.43 +0.4 225,889 + +0.7 225,890 - H281DRAFT_04492 0.43 +1.0 225,890 - H281DRAFT_04492 0.43 +0.9 226,000 - H281DRAFT_04492 0.57 +0.4 226,026 - H281DRAFT_04492 0.60 +1.7 226,141 + H281DRAFT_04492 0.75 +0.7 226,141 + H281DRAFT_04492 0.75 +0.5 226,141 + H281DRAFT_04492 0.75 +0.1 226,141 + H281DRAFT_04492 0.75 +0.8 226,142 - H281DRAFT_04492 0.75 +0.4 226,142 - H281DRAFT_04492 0.75 +0.4 226,144 - H281DRAFT_04492 0.76 +1.0 226,257 - +0.3 226,479 - +0.7 226,548 + +0.5 226,549 - +0.4 226,549 - -0.1 226,654 + H281DRAFT_04493 0.20 +0.2 226,655 - H281DRAFT_04493 0.20 +0.2 226,663 + H281DRAFT_04493 0.22 +0.1 226,680 + H281DRAFT_04493 0.25 -0.0 226,680 + H281DRAFT_04493 0.25 +0.7 226,680 + H281DRAFT_04493 0.25 +0.3 226,681 - H281DRAFT_04493 0.26 +0.4 226,882 + H281DRAFT_04493 0.71 +0.7 226,883 - H281DRAFT_04493 0.71 +0.4 226,883 - H281DRAFT_04493 0.71 +0.2 226,908 - H281DRAFT_04493 0.77 +0.8 226,908 - H281DRAFT_04493 0.77 +1.1 227,009 - +0.4 227,022 - +0.7 227,059 - +1.0 227,178 - -2.0 227,183 - -1.2
Or see this region's nucleotide sequence