Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03893 and H281DRAFT_03894 are separated by 245 nucleotides H281DRAFT_03894 and H281DRAFT_03895 are separated by 527 nucleotides
H281DRAFT_03893: H281DRAFT_03893 - hypothetical protein, at 424,078 to 424,905
_03893
H281DRAFT_03894: H281DRAFT_03894 - 3-methylfumaryl-CoA hydratase, at 425,151 to 425,993
_03894
H281DRAFT_03895: H281DRAFT_03895 - Uncharacterized conserved protein YfaA, DUF2138 family, at 426,521 to 428,323
_03895
Position (kb) 425
426 Strain fitness (log2 ratio) -1
0
1 at 424.194 kb on - strand, within H281DRAFT_03893 at 424.194 kb on - strand, within H281DRAFT_03893 at 424.195 kb on + strand, within H281DRAFT_03893 at 424.195 kb on + strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.196 kb on - strand, within H281DRAFT_03893 at 424.389 kb on - strand, within H281DRAFT_03893 at 424.410 kb on + strand, within H281DRAFT_03893 at 424.410 kb on + strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.411 kb on - strand, within H281DRAFT_03893 at 424.413 kb on - strand, within H281DRAFT_03893 at 424.413 kb on - strand, within H281DRAFT_03893 at 424.413 kb on - strand at 424.413 kb on - strand, within H281DRAFT_03893 at 424.427 kb on + strand, within H281DRAFT_03893 at 424.427 kb on + strand, within H281DRAFT_03893 at 424.427 kb on + strand, within H281DRAFT_03893 at 424.428 kb on - strand, within H281DRAFT_03893 at 424.428 kb on - strand, within H281DRAFT_03893 at 424.438 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.616 kb on + strand, within H281DRAFT_03893 at 424.617 kb on - strand, within H281DRAFT_03893 at 424.622 kb on + strand, within H281DRAFT_03893 at 424.622 kb on + strand, within H281DRAFT_03893 at 424.623 kb on - strand, within H281DRAFT_03893 at 424.657 kb on + strand, within H281DRAFT_03893 at 424.689 kb on - strand, within H281DRAFT_03893 at 424.899 kb on + strand at 424.900 kb on - strand at 424.945 kb on + strand at 424.945 kb on + strand at 424.945 kb on + strand at 424.946 kb on - strand at 424.946 kb on - strand at 424.946 kb on - strand at 424.946 kb on - strand at 424.986 kb on + strand at 424.986 kb on + strand at 425.080 kb on - strand at 425.109 kb on + strand at 425.109 kb on + strand at 425.109 kb on + strand at 425.109 kb on + strand at 425.110 kb on - strand at 425.112 kb on + strand at 425.112 kb on + strand at 425.113 kb on - strand at 425.113 kb on - strand at 425.301 kb on + strand at 425.302 kb on - strand, within H281DRAFT_03894 at 425.302 kb on - strand, within H281DRAFT_03894 at 425.456 kb on + strand, within H281DRAFT_03894 at 425.581 kb on - strand, within H281DRAFT_03894 at 425.757 kb on + strand, within H281DRAFT_03894 at 425.936 kb on - strand at 425.959 kb on - strand at 425.959 kb on - strand at 426.070 kb on - strand at 426.131 kb on + strand at 426.170 kb on + strand at 426.170 kb on + strand at 426.171 kb on - strand at 426.259 kb on + strand at 426.260 kb on - strand at 426.453 kb on + strand at 426.490 kb on - strand at 426.490 kb on - strand at 426.492 kb on + strand at 426.536 kb on - strand at 426.761 kb on + strand, within H281DRAFT_03895 at 426.778 kb on + strand, within H281DRAFT_03895 at 426.779 kb on - strand, within H281DRAFT_03895
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 424,194 - H281DRAFT_03893 0.14 +0.3 424,194 - H281DRAFT_03893 0.14 -0.8 424,195 + H281DRAFT_03893 0.14 +0.7 424,195 + H281DRAFT_03893 0.14 -0.7 424,196 - H281DRAFT_03893 0.14 +0.7 424,196 - H281DRAFT_03893 0.14 -0.1 424,196 - H281DRAFT_03893 0.14 -0.3 424,196 - H281DRAFT_03893 0.14 +0.7 424,389 - H281DRAFT_03893 0.38 -0.1 424,410 + H281DRAFT_03893 0.40 +0.6 424,410 + H281DRAFT_03893 0.40 +0.4 424,411 - H281DRAFT_03893 0.40 -0.2 424,411 - H281DRAFT_03893 0.40 -0.1 424,411 - H281DRAFT_03893 0.40 +0.8 424,411 - H281DRAFT_03893 0.40 +0.5 424,411 - H281DRAFT_03893 0.40 +0.1 424,413 - H281DRAFT_03893 0.40 +0.4 424,413 - H281DRAFT_03893 0.40 -0.5 424,413 - +0.9 424,413 - H281DRAFT_03893 0.40 +0.2 424,427 + H281DRAFT_03893 0.42 +0.6 424,427 + H281DRAFT_03893 0.42 +0.3 424,427 + H281DRAFT_03893 0.42 -0.3 424,428 - H281DRAFT_03893 0.42 -0.0 424,428 - H281DRAFT_03893 0.42 -0.3 424,438 + H281DRAFT_03893 0.43 +1.6 424,616 + H281DRAFT_03893 0.65 +0.2 424,616 + H281DRAFT_03893 0.65 +0.1 424,616 + H281DRAFT_03893 0.65 -0.4 424,616 + H281DRAFT_03893 0.65 -0.2 424,617 - H281DRAFT_03893 0.65 +0.8 424,622 + H281DRAFT_03893 0.66 +0.3 424,622 + H281DRAFT_03893 0.66 +0.7 424,623 - H281DRAFT_03893 0.66 +0.1 424,657 + H281DRAFT_03893 0.70 -1.3 424,689 - H281DRAFT_03893 0.74 -0.1 424,899 + +0.2 424,900 - -0.6 424,945 + +0.1 424,945 + +0.2 424,945 + -0.3 424,946 - -0.3 424,946 - +0.1 424,946 - -0.6 424,946 - +0.3 424,986 + +0.9 424,986 + +0.1 425,080 - +1.5 425,109 + +0.4 425,109 + +0.5 425,109 + -0.2 425,109 + +0.4 425,110 - -0.4 425,112 + +0.4 425,112 + +0.3 425,113 - +0.9 425,113 - -0.2 425,301 + -0.1 425,302 - H281DRAFT_03894 0.18 +0.7 425,302 - H281DRAFT_03894 0.18 +0.9 425,456 + H281DRAFT_03894 0.36 +0.6 425,581 - H281DRAFT_03894 0.51 +0.1 425,757 + H281DRAFT_03894 0.72 +0.3 425,936 - -0.1 425,959 - +0.1 425,959 - +0.0 426,070 - -0.2 426,131 + +0.5 426,170 + -0.2 426,170 + -0.2 426,171 - +0.3 426,259 + +0.9 426,260 - -0.3 426,453 + +1.0 426,490 - +0.3 426,490 - -0.0 426,492 + +0.8 426,536 - -0.3 426,761 + H281DRAFT_03895 0.13 -0.4 426,778 + H281DRAFT_03895 0.14 +0.5 426,779 - H281DRAFT_03895 0.14 +0.4
Or see this region's nucleotide sequence