Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03557 and H281DRAFT_03558 are separated by 21 nucleotides H281DRAFT_03558 and H281DRAFT_03559 are separated by 178 nucleotides H281DRAFT_03559 and H281DRAFT_03560 are separated by 107 nucleotides
H281DRAFT_03557: H281DRAFT_03557 - hypothetical protein, at 62,109 to 63,332
_03557
H281DRAFT_03558: H281DRAFT_03558 - Threonine/homoserine/homoserine lactone efflux protein, at 63,354 to 63,953
_03558
H281DRAFT_03559: H281DRAFT_03559 - hypothetical protein, at 64,132 to 64,389
_03559
H281DRAFT_03560: H281DRAFT_03560 - hypothetical protein, at 64,497 to 66,698
_03560
Position (kb) 64
65 Strain fitness (log2 ratio) -2
-1
0
1 at 63.330 kb on + strand at 63.330 kb on + strand at 63.330 kb on + strand at 63.535 kb on + strand, within H281DRAFT_03558 at 63.536 kb on - strand, within H281DRAFT_03558 at 63.536 kb on - strand at 63.683 kb on + strand, within H281DRAFT_03558 at 63.684 kb on - strand, within H281DRAFT_03558 at 63.707 kb on - strand, within H281DRAFT_03558 at 63.791 kb on + strand, within H281DRAFT_03558 at 63.792 kb on - strand, within H281DRAFT_03558 at 63.792 kb on - strand, within H281DRAFT_03558 at 63.792 kb on - strand, within H281DRAFT_03558 at 63.878 kb on + strand, within H281DRAFT_03558 at 63.878 kb on + strand, within H281DRAFT_03558 at 63.878 kb on + strand, within H281DRAFT_03558 at 63.879 kb on - strand, within H281DRAFT_03558 at 63.879 kb on - strand, within H281DRAFT_03558 at 63.990 kb on - strand at 64.088 kb on + strand at 64.298 kb on - strand, within H281DRAFT_03559 at 64.375 kb on + strand at 64.442 kb on + strand at 64.442 kb on + strand at 64.442 kb on + strand at 64.443 kb on - strand at 64.443 kb on - strand at 64.444 kb on + strand at 64.444 kb on + strand at 64.444 kb on + strand at 64.445 kb on - strand at 64.445 kb on - strand at 64.445 kb on - strand at 64.446 kb on + strand at 64.447 kb on - strand at 64.498 kb on + strand at 64.498 kb on + strand at 64.499 kb on - strand at 64.499 kb on - strand at 64.545 kb on + strand at 64.545 kb on + strand at 64.546 kb on - strand at 64.546 kb on - strand at 64.551 kb on + strand at 64.558 kb on + strand at 64.558 kb on + strand at 64.598 kb on - strand at 64.646 kb on + strand at 64.646 kb on + strand at 64.646 kb on + strand at 64.646 kb on + strand at 64.646 kb on + strand at 64.646 kb on + strand at 64.647 kb on - strand at 64.648 kb on + strand at 64.649 kb on - strand at 64.679 kb on - strand at 64.699 kb on + strand at 64.721 kb on - strand, within H281DRAFT_03560 at 64.743 kb on + strand, within H281DRAFT_03560 at 64.831 kb on + strand, within H281DRAFT_03560 at 64.893 kb on - strand, within H281DRAFT_03560 at 64.906 kb on + strand, within H281DRAFT_03560 at 64.906 kb on + strand, within H281DRAFT_03560 at 64.906 kb on + strand, within H281DRAFT_03560 at 64.906 kb on + strand, within H281DRAFT_03560 at 64.906 kb on + strand, within H281DRAFT_03560 at 64.907 kb on - strand, within H281DRAFT_03560 at 64.907 kb on - strand, within H281DRAFT_03560 at 64.907 kb on - strand, within H281DRAFT_03560 at 64.907 kb on - strand, within H281DRAFT_03560 at 64.907 kb on - strand, within H281DRAFT_03560 at 64.907 kb on - strand, within H281DRAFT_03560 at 64.907 kb on - strand, within H281DRAFT_03560 at 64.930 kb on + strand, within H281DRAFT_03560 at 64.997 kb on - strand, within H281DRAFT_03560 at 65.327 kb on + strand, within H281DRAFT_03560
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 63,330 + +0.4 63,330 + -0.7 63,330 + +0.8 63,535 + H281DRAFT_03558 0.30 -0.8 63,536 - H281DRAFT_03558 0.30 +0.0 63,536 - -0.4 63,683 + H281DRAFT_03558 0.55 -0.3 63,684 - H281DRAFT_03558 0.55 -0.4 63,707 - H281DRAFT_03558 0.59 -0.1 63,791 + H281DRAFT_03558 0.73 +0.5 63,792 - H281DRAFT_03558 0.73 +0.3 63,792 - H281DRAFT_03558 0.73 -0.4 63,792 - H281DRAFT_03558 0.73 +0.1 63,878 + H281DRAFT_03558 0.87 +0.2 63,878 + H281DRAFT_03558 0.87 -0.3 63,878 + H281DRAFT_03558 0.87 +0.1 63,879 - H281DRAFT_03558 0.88 +1.7 63,879 - H281DRAFT_03558 0.88 +1.1 63,990 - -0.1 64,088 + -1.3 64,298 - H281DRAFT_03559 0.64 +0.5 64,375 + +0.5 64,442 + -0.1 64,442 + -1.1 64,442 + +0.1 64,443 - -0.2 64,443 - -0.3 64,444 + +1.5 64,444 + -0.4 64,444 + +0.2 64,445 - +0.2 64,445 - +0.2 64,445 - -0.2 64,446 + +0.0 64,447 - -0.4 64,498 + +0.3 64,498 + -0.1 64,499 - -0.1 64,499 - +0.2 64,545 + +0.8 64,545 + +0.1 64,546 - +0.6 64,546 - -0.3 64,551 + +0.5 64,558 + -1.7 64,558 + -0.1 64,598 - +0.3 64,646 + +0.3 64,646 + +0.1 64,646 + -0.2 64,646 + +0.9 64,646 + +1.1 64,646 + +0.4 64,647 - +0.4 64,648 + +0.1 64,649 - -0.3 64,679 - +0.5 64,699 + +0.1 64,721 - H281DRAFT_03560 0.10 +0.5 64,743 + H281DRAFT_03560 0.11 -1.0 64,831 + H281DRAFT_03560 0.15 -0.2 64,893 - H281DRAFT_03560 0.18 +0.1 64,906 + H281DRAFT_03560 0.19 -0.6 64,906 + H281DRAFT_03560 0.19 -0.2 64,906 + H281DRAFT_03560 0.19 +1.4 64,906 + H281DRAFT_03560 0.19 +0.2 64,906 + H281DRAFT_03560 0.19 -0.0 64,907 - H281DRAFT_03560 0.19 -0.2 64,907 - H281DRAFT_03560 0.19 +0.6 64,907 - H281DRAFT_03560 0.19 -0.2 64,907 - H281DRAFT_03560 0.19 +0.4 64,907 - H281DRAFT_03560 0.19 -0.3 64,907 - H281DRAFT_03560 0.19 -2.4 64,907 - H281DRAFT_03560 0.19 +0.3 64,930 + H281DRAFT_03560 0.20 -2.5 64,997 - H281DRAFT_03560 0.23 -0.4 65,327 + H281DRAFT_03560 0.38 +0.3
Or see this region's nucleotide sequence