Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02570 and H281DRAFT_02571 are separated by 162 nucleotides H281DRAFT_02571 and H281DRAFT_02572 are separated by 82 nucleotides H281DRAFT_02572 and H281DRAFT_02573 overlap by 4 nucleotides
H281DRAFT_02570: H281DRAFT_02570 - transcriptional regulator, IclR family, at 145,492 to 146,298
_02570
H281DRAFT_02571: H281DRAFT_02571 - amino acid ABC transporter substrate-binding protein, PAAT family, at 146,461 to 147,231
_02571
H281DRAFT_02572: H281DRAFT_02572 - amino acid ABC transporter membrane protein, PAAT family, at 147,314 to 147,970
_02572
H281DRAFT_02573: H281DRAFT_02573 - amino acid ABC transporter ATP-binding protein, PAAT family, at 147,967 to 148,725
_02573
Position (kb) 146
147
148 Strain fitness (log2 ratio) -1
0
1 at 145.850 kb on + strand, within H281DRAFT_02570 at 145.851 kb on - strand, within H281DRAFT_02570 at 145.851 kb on - strand, within H281DRAFT_02570 at 145.920 kb on - strand, within H281DRAFT_02570 at 146.030 kb on + strand, within H281DRAFT_02570 at 146.099 kb on + strand, within H281DRAFT_02570 at 146.121 kb on - strand, within H281DRAFT_02570 at 146.121 kb on - strand, within H281DRAFT_02570 at 146.322 kb on + strand at 146.322 kb on + strand at 146.323 kb on - strand at 146.457 kb on - strand at 146.457 kb on - strand at 146.959 kb on + strand, within H281DRAFT_02571 at 147.254 kb on + strand at 147.301 kb on - strand at 147.301 kb on - strand at 147.527 kb on - strand, within H281DRAFT_02572 at 147.555 kb on + strand, within H281DRAFT_02572 at 147.556 kb on - strand, within H281DRAFT_02572 at 147.556 kb on - strand, within H281DRAFT_02572 at 147.872 kb on + strand, within H281DRAFT_02572 at 147.873 kb on - strand, within H281DRAFT_02572 at 148.124 kb on - strand, within H281DRAFT_02573
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 145,850 + H281DRAFT_02570 0.44 +0.4 145,851 - H281DRAFT_02570 0.44 -0.3 145,851 - H281DRAFT_02570 0.44 -0.9 145,920 - H281DRAFT_02570 0.53 -0.2 146,030 + H281DRAFT_02570 0.67 +0.2 146,099 + H281DRAFT_02570 0.75 -0.2 146,121 - H281DRAFT_02570 0.78 +0.6 146,121 - H281DRAFT_02570 0.78 +0.3 146,322 + +0.5 146,322 + -0.3 146,323 - -1.1 146,457 - +0.0 146,457 - +0.3 146,959 + H281DRAFT_02571 0.65 +0.6 147,254 + -0.1 147,301 - +1.2 147,301 - -0.1 147,527 - H281DRAFT_02572 0.32 -0.1 147,555 + H281DRAFT_02572 0.37 -0.5 147,556 - H281DRAFT_02572 0.37 -0.1 147,556 - H281DRAFT_02572 0.37 -0.2 147,872 + H281DRAFT_02572 0.85 -0.4 147,873 - H281DRAFT_02572 0.85 +0.7 148,124 - H281DRAFT_02573 0.21 +0.9
Or see this region's nucleotide sequence