Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02562 and H281DRAFT_02563 are separated by 23 nucleotides H281DRAFT_02563 and H281DRAFT_02564 are separated by 54 nucleotides H281DRAFT_02564 and H281DRAFT_02565 are separated by 33 nucleotides H281DRAFT_02565 and H281DRAFT_02566 are separated by 52 nucleotides
H281DRAFT_02562: H281DRAFT_02562 - Glycine/D-amino acid oxidase (deaminating), at 137,049 to 138,389
_02562
H281DRAFT_02563: H281DRAFT_02563 - amino acid ABC transporter membrane protein, PAAT family, at 138,413 to 139,210
_02563
H281DRAFT_02564: H281DRAFT_02564 - amino acid ABC transporter substrate-binding protein, PAAT family, at 139,265 to 140,077
_02564
H281DRAFT_02565: H281DRAFT_02565 - amino acid ABC transporter ATP-binding protein, PAAT family, at 140,111 to 140,836
_02565
H281DRAFT_02566: H281DRAFT_02566 - Glycine/D-amino acid oxidase (deaminating), at 140,889 to 142,214
_02566
Position (kb) 139
140
141 Strain fitness (log2 ratio) -1
0
1
2 at 138.394 kb on + strand at 138.586 kb on - strand, within H281DRAFT_02563 at 138.690 kb on + strand, within H281DRAFT_02563 at 138.863 kb on + strand, within H281DRAFT_02563 at 138.876 kb on + strand, within H281DRAFT_02563 at 139.531 kb on - strand, within H281DRAFT_02564 at 139.611 kb on + strand, within H281DRAFT_02564 at 139.612 kb on - strand, within H281DRAFT_02564 at 139.932 kb on + strand, within H281DRAFT_02564 at 139.933 kb on - strand, within H281DRAFT_02564 at 140.440 kb on - strand, within H281DRAFT_02565 at 140.924 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 138,394 + +0.6 138,586 - H281DRAFT_02563 0.22 +0.3 138,690 + H281DRAFT_02563 0.35 -0.1 138,863 + H281DRAFT_02563 0.56 -0.2 138,876 + H281DRAFT_02563 0.58 +0.2 139,531 - H281DRAFT_02564 0.33 -0.2 139,611 + H281DRAFT_02564 0.43 +0.5 139,612 - H281DRAFT_02564 0.43 +1.2 139,932 + H281DRAFT_02564 0.82 +0.3 139,933 - H281DRAFT_02564 0.82 +2.5 140,440 - H281DRAFT_02565 0.45 +0.4 140,924 + -0.3
Or see this region's nucleotide sequence