Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01994 and H281DRAFT_01995 are separated by 73 nucleotides H281DRAFT_01995 and H281DRAFT_01996 are separated by 326 nucleotides H281DRAFT_01996 and H281DRAFT_01997 are separated by 167 nucleotides H281DRAFT_01997 and H281DRAFT_01998 are separated by 18 nucleotides
H281DRAFT_01994: H281DRAFT_01994 - cytochrome c oxidase subunit 2, at 112,384 to 114,018
_01994
H281DRAFT_01995: H281DRAFT_01995 - Uncharacterized membrane protein, at 114,092 to 114,565
_01995
H281DRAFT_01996: H281DRAFT_01996 - malonyl-CoA O-methyltransferase, at 114,892 to 115,857
_01996
H281DRAFT_01997: H281DRAFT_01997 - comF family protein, at 116,025 to 116,726
_01997
H281DRAFT_01998: H281DRAFT_01998 - tRNA (cytidine/uridine-2'-O-)-methyltransferase, at 116,745 to 117,215
_01998
Position (kb)
114
115
116 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 113.994 kb on + strand at 113.995 kb on - strand at 114.112 kb on + strand at 114.113 kb on - strand at 114.113 kb on - strand at 114.113 kb on - strand at 114.291 kb on - strand, within H281DRAFT_01995 at 114.291 kb on - strand, within H281DRAFT_01995 at 114.291 kb on - strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.345 kb on + strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.346 kb on - strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.465 kb on + strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.466 kb on - strand, within H281DRAFT_01995 at 114.648 kb on - strand at 114.751 kb on - strand at 114.869 kb on + strand at 114.869 kb on + strand at 114.870 kb on - strand at 114.870 kb on - strand at 114.870 kb on - strand at 114.870 kb on - strand at 114.885 kb on + strand at 114.886 kb on - strand at 114.886 kb on - strand at 114.886 kb on - strand at 114.886 kb on - strand at 115.886 kb on + strand at 115.886 kb on + strand at 115.886 kb on + strand at 115.887 kb on - strand at 115.887 kb on - strand at 115.956 kb on + strand at 115.956 kb on + strand at 115.957 kb on - strand at 115.957 kb on - strand at 116.106 kb on + strand, within H281DRAFT_01997 at 116.184 kb on + strand, within H281DRAFT_01997 at 116.184 kb on + strand, within H281DRAFT_01997 at 116.184 kb on + strand, within H281DRAFT_01997 at 116.427 kb on + strand, within H281DRAFT_01997 at 116.428 kb on - strand, within H281DRAFT_01997 at 116.429 kb on + strand, within H281DRAFT_01997 at 116.429 kb on + strand, within H281DRAFT_01997 at 116.605 kb on + strand, within H281DRAFT_01997 at 116.605 kb on + strand, within H281DRAFT_01997 at 116.606 kb on - strand, within H281DRAFT_01997 at 116.606 kb on - strand, within H281DRAFT_01997 at 116.606 kb on - strand, within H281DRAFT_01997 at 116.606 kb on - strand, within H281DRAFT_01997 at 116.623 kb on + strand, within H281DRAFT_01997 at 116.623 kb on + strand, within H281DRAFT_01997 at 116.623 kb on + strand, within H281DRAFT_01997 at 116.623 kb on + strand, within H281DRAFT_01997 at 116.624 kb on - strand, within H281DRAFT_01997 at 116.624 kb on - strand, within H281DRAFT_01997 at 116.624 kb on - strand, within H281DRAFT_01997 at 116.624 kb on - strand, within H281DRAFT_01997 at 116.725 kb on - strand at 116.731 kb on + strand at 116.732 kb on - strand at 116.744 kb on + strand at 116.744 kb on + strand at 116.744 kb on + strand at 116.744 kb on + strand at 116.744 kb on + strand at 116.745 kb on - strand at 116.745 kb on - strand at 116.745 kb on - strand at 116.745 kb on - strand at 116.806 kb on + strand, within H281DRAFT_01998
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 113,994 + -0.8 113,995 - -0.4 114,112 + -0.0 114,113 - +1.0 114,113 - +0.0 114,113 - -0.1 114,291 - H281DRAFT_01995 0.42 -0.0 114,291 - H281DRAFT_01995 0.42 +0.5 114,291 - H281DRAFT_01995 0.42 -0.0 114,345 + H281DRAFT_01995 0.53 -2.3 114,345 + H281DRAFT_01995 0.53 -1.1 114,345 + H281DRAFT_01995 0.53 -1.0 114,345 + H281DRAFT_01995 0.53 -2.9 114,346 - H281DRAFT_01995 0.54 +0.3 114,346 - H281DRAFT_01995 0.54 -0.2 114,346 - H281DRAFT_01995 0.54 +0.1 114,346 - H281DRAFT_01995 0.54 +0.0 114,346 - H281DRAFT_01995 0.54 -0.2 114,346 - H281DRAFT_01995 0.54 -0.1 114,465 + H281DRAFT_01995 0.79 -2.9 114,465 + H281DRAFT_01995 0.79 -1.2 114,465 + H281DRAFT_01995 0.79 -3.4 114,465 + H281DRAFT_01995 0.79 -1.3 114,466 - H281DRAFT_01995 0.79 -0.1 114,466 - H281DRAFT_01995 0.79 -0.0 114,466 - H281DRAFT_01995 0.79 +0.0 114,466 - H281DRAFT_01995 0.79 +0.5 114,466 - H281DRAFT_01995 0.79 +0.5 114,466 - H281DRAFT_01995 0.79 -0.6 114,648 - -0.3 114,751 - -0.4 114,869 + +0.4 114,869 + +0.2 114,870 - -0.0 114,870 - +0.2 114,870 - -0.4 114,870 - +0.3 114,885 + -0.2 114,886 - -0.6 114,886 - -0.4 114,886 - -0.7 114,886 - +0.6 115,886 + -0.7 115,886 + +0.4 115,886 + +0.2 115,887 - +0.6 115,887 - -0.5 115,956 + -0.1 115,956 + -0.2 115,957 - +0.7 115,957 - +1.0 116,106 + H281DRAFT_01997 0.12 -1.0 116,184 + H281DRAFT_01997 0.23 +1.0 116,184 + H281DRAFT_01997 0.23 -0.0 116,184 + H281DRAFT_01997 0.23 -0.3 116,427 + H281DRAFT_01997 0.57 -0.7 116,428 - H281DRAFT_01997 0.57 +0.1 116,429 + H281DRAFT_01997 0.58 -0.0 116,429 + H281DRAFT_01997 0.58 +0.5 116,605 + H281DRAFT_01997 0.83 +0.4 116,605 + H281DRAFT_01997 0.83 -0.0 116,606 - H281DRAFT_01997 0.83 -0.2 116,606 - H281DRAFT_01997 0.83 +0.0 116,606 - H281DRAFT_01997 0.83 +0.6 116,606 - H281DRAFT_01997 0.83 -0.5 116,623 + H281DRAFT_01997 0.85 +0.4 116,623 + H281DRAFT_01997 0.85 +0.6 116,623 + H281DRAFT_01997 0.85 -0.0 116,623 + H281DRAFT_01997 0.85 -0.1 116,624 - H281DRAFT_01997 0.85 -0.5 116,624 - H281DRAFT_01997 0.85 +0.0 116,624 - H281DRAFT_01997 0.85 -0.0 116,624 - H281DRAFT_01997 0.85 +0.3 116,725 - +0.3 116,731 + -1.0 116,732 - -0.5 116,744 + -1.6 116,744 + +0.2 116,744 + +2.6 116,744 + +0.2 116,744 + -0.1 116,745 - -0.8 116,745 - +0.4 116,745 - +0.8 116,745 - -0.2 116,806 + H281DRAFT_01998 0.13 -0.0
Or see this region's nucleotide sequence