Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01564 and H281DRAFT_01565 are separated by 149 nucleotides H281DRAFT_01565 and H281DRAFT_01566 overlap by 35 nucleotides
H281DRAFT_01564: H281DRAFT_01564 - diguanylate cyclase/phosphodiesterase, at 436,001 to 438,934
_01564
H281DRAFT_01565: H281DRAFT_01565 - Sugar phosphate permease, at 439,084 to 440,502
_01565
H281DRAFT_01566: H281DRAFT_01566 - DNA-binding transcriptional regulator, LysR family, at 440,468 to 441,490
_01566
Position (kb) 439
440
441 Strain fitness (log2 ratio) -2
-1
0
1 at 438.089 kb on + strand, within H281DRAFT_01564 at 438.300 kb on + strand, within H281DRAFT_01564 at 438.301 kb on - strand, within H281DRAFT_01564 at 438.301 kb on - strand, within H281DRAFT_01564 at 438.342 kb on + strand, within H281DRAFT_01564 at 438.345 kb on + strand, within H281DRAFT_01564 at 438.358 kb on + strand, within H281DRAFT_01564 at 438.358 kb on + strand, within H281DRAFT_01564 at 438.359 kb on - strand, within H281DRAFT_01564 at 438.359 kb on - strand, within H281DRAFT_01564 at 438.378 kb on + strand, within H281DRAFT_01564 at 438.378 kb on + strand, within H281DRAFT_01564 at 438.390 kb on + strand, within H281DRAFT_01564 at 438.477 kb on + strand, within H281DRAFT_01564 at 438.650 kb on + strand at 438.650 kb on + strand at 438.651 kb on - strand at 438.651 kb on - strand at 438.651 kb on - strand at 438.841 kb on + strand at 438.842 kb on - strand at 438.842 kb on - strand at 439.024 kb on + strand at 439.178 kb on - strand at 439.181 kb on + strand at 439.182 kb on - strand at 439.182 kb on - strand at 439.182 kb on - strand at 439.182 kb on - strand at 439.319 kb on - strand, within H281DRAFT_01565 at 439.344 kb on - strand, within H281DRAFT_01565 at 439.435 kb on + strand, within H281DRAFT_01565 at 439.436 kb on - strand, within H281DRAFT_01565 at 439.436 kb on - strand, within H281DRAFT_01565 at 439.436 kb on - strand at 439.437 kb on + strand, within H281DRAFT_01565 at 439.445 kb on - strand, within H281DRAFT_01565 at 440.170 kb on + strand, within H281DRAFT_01565 at 440.171 kb on - strand, within H281DRAFT_01565 at 440.204 kb on - strand, within H281DRAFT_01565 at 440.384 kb on - strand at 440.541 kb on - strand at 440.550 kb on + strand at 440.551 kb on - strand at 440.600 kb on + strand, within H281DRAFT_01566 at 441.198 kb on - strand, within H281DRAFT_01566 at 441.198 kb on - strand, within H281DRAFT_01566
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 438,089 + H281DRAFT_01564 0.71 -0.5 438,300 + H281DRAFT_01564 0.78 +0.5 438,301 - H281DRAFT_01564 0.78 +0.1 438,301 - H281DRAFT_01564 0.78 -0.5 438,342 + H281DRAFT_01564 0.80 +0.6 438,345 + H281DRAFT_01564 0.80 -2.7 438,358 + H281DRAFT_01564 0.80 -0.3 438,358 + H281DRAFT_01564 0.80 +0.9 438,359 - H281DRAFT_01564 0.80 -1.0 438,359 - H281DRAFT_01564 0.80 -0.8 438,378 + H281DRAFT_01564 0.81 -0.0 438,378 + H281DRAFT_01564 0.81 -1.4 438,390 + H281DRAFT_01564 0.81 +0.0 438,477 + H281DRAFT_01564 0.84 +0.1 438,650 + +0.1 438,650 + +0.4 438,651 - +0.1 438,651 - +1.1 438,651 - +0.1 438,841 + +0.0 438,842 - +0.2 438,842 - +0.4 439,024 + -0.1 439,178 - -0.5 439,181 + +0.1 439,182 - +0.9 439,182 - +0.5 439,182 - -0.5 439,182 - +0.6 439,319 - H281DRAFT_01565 0.17 -1.5 439,344 - H281DRAFT_01565 0.18 +0.8 439,435 + H281DRAFT_01565 0.25 -0.4 439,436 - H281DRAFT_01565 0.25 -0.4 439,436 - H281DRAFT_01565 0.25 -0.0 439,436 - -0.2 439,437 + H281DRAFT_01565 0.25 +0.2 439,445 - H281DRAFT_01565 0.25 -0.1 440,170 + H281DRAFT_01565 0.77 -0.9 440,171 - H281DRAFT_01565 0.77 -0.8 440,204 - H281DRAFT_01565 0.79 -1.4 440,384 - +1.4 440,541 - +0.2 440,550 + +0.2 440,551 - -0.4 440,600 + H281DRAFT_01566 0.13 -1.2 441,198 - H281DRAFT_01566 0.71 +0.2 441,198 - H281DRAFT_01566 0.71 -0.0
Or see this region's nucleotide sequence