Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00111 and H281DRAFT_00112 are separated by 223 nucleotides H281DRAFT_00112 and H281DRAFT_00113 are separated by 42 nucleotides
H281DRAFT_00111: H281DRAFT_00111 - RND family efflux transporter, MFP subunit, at 117,739 to 118,962
_00111
H281DRAFT_00112: H281DRAFT_00112 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 119,186 to 120,346
_00112
H281DRAFT_00113: H281DRAFT_00113 - transcriptional regulator, LysR family, at 120,389 to 121,330
_00113
Position (kb)
119
120
121 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 118.213 kb on + strand, within H281DRAFT_00111 at 118.487 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111 at 118.767 kb on + strand, within H281DRAFT_00111 at 118.958 kb on - strand at 119.117 kb on + strand at 119.118 kb on - strand at 119.118 kb on - strand at 119.255 kb on + strand at 119.406 kb on + strand, within H281DRAFT_00112 at 119.455 kb on - strand, within H281DRAFT_00112 at 119.761 kb on + strand, within H281DRAFT_00112 at 119.762 kb on - strand, within H281DRAFT_00112 at 119.838 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 120.156 kb on + strand, within H281DRAFT_00112 at 120.214 kb on + strand, within H281DRAFT_00112 at 120.221 kb on + strand, within H281DRAFT_00112 at 120.483 kb on + strand at 120.483 kb on + strand at 120.484 kb on - strand, within H281DRAFT_00113 at 120.484 kb on - strand, within H281DRAFT_00113 at 120.865 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 120.867 kb on + strand, within H281DRAFT_00113 at 121.078 kb on + strand, within H281DRAFT_00113 at 121.249 kb on + strand at 121.249 kb on + strand at 121.251 kb on + strand at 121.252 kb on - strand at 121.332 kb on + strand at 121.333 kb on - strand at 121.334 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 118,213 + H281DRAFT_00111 0.39 -1.8 118,487 + H281DRAFT_00111 0.61 -0.0 118,634 + H281DRAFT_00111 0.73 -0.0 118,634 + H281DRAFT_00111 0.73 +0.0 118,767 + H281DRAFT_00111 0.84 -0.2 118,958 - +0.3 119,117 + +0.7 119,118 - -0.5 119,118 - -0.7 119,255 + -0.5 119,406 + H281DRAFT_00112 0.19 -0.4 119,455 - H281DRAFT_00112 0.23 +0.1 119,761 + H281DRAFT_00112 0.50 -0.1 119,762 - H281DRAFT_00112 0.50 +0.6 119,838 + H281DRAFT_00112 0.56 +0.1 119,892 + H281DRAFT_00112 0.61 -0.9 119,892 + H281DRAFT_00112 0.61 +0.4 120,156 + H281DRAFT_00112 0.84 +0.4 120,214 + H281DRAFT_00112 0.89 +0.1 120,221 + H281DRAFT_00112 0.89 -0.7 120,483 + -4.2 120,483 + -4.2 120,484 - H281DRAFT_00113 0.10 -3.7 120,484 - H281DRAFT_00113 0.10 -2.6 120,865 + H281DRAFT_00113 0.51 -1.7 120,867 + H281DRAFT_00113 0.51 -2.3 120,867 + H281DRAFT_00113 0.51 -2.9 120,867 + H281DRAFT_00113 0.51 -0.2 121,078 + H281DRAFT_00113 0.73 -1.9 121,249 + -0.3 121,249 + -0.1 121,251 + -0.1 121,252 - -3.2 121,332 + +0.5 121,333 - -0.8 121,334 + +0.3
Or see this region's nucleotide sequence