Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21375

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
5,270,402	+		CA265_RS21370	0.21	-0.1
5,270,572	+		CA265_RS21370	0.47	-1.3
5,270,587	-		CA265_RS21370	0.50	-0.0
5,270,604	-		CA265_RS21370	0.52	-0.5
5,270,607	+		CA265_RS21370	0.53	-1.1
5,270,607	+		CA265_RS21370	0.53	-1.2
5,270,640	+		CA265_RS21370	0.58	+0.5
5,270,641	-		CA265_RS21370	0.58	-0.9
5,270,645	-		CA265_RS21370	0.59	-0.2
5,270,671	-		CA265_RS21370	0.63	+0.2
5,270,671	-		CA265_RS21370	0.63	+2.1
5,270,697	+		CA265_RS21370	0.67	-0.5
5,270,789	-		CA265_RS21370	0.82	+0.5
5,270,825	-		CA265_RS21370	0.87	-0.1
5,270,938	-				-0.1
5,270,943	+				-0.1
5,270,986	+				-0.1
5,271,005	-				+0.2
5,271,082	+				+0.6
5,271,083	-				-0.4
5,271,146	-				-0.9
5,271,177	+				+0.4
5,271,181	-				-0.2
5,271,181	-				-0.3
5,271,182	+				-0.4
5,271,267	+				-0.0
5,271,267	+				+0.5
5,271,341	+				-0.2
5,271,354	-				-0.4
5,271,435	+				-1.6
5,271,436	-				-0.5
5,271,444	-				+2.1
5,271,468	-				-0.0
5,271,511	-				+0.7
5,271,562	+		CA265_RS21375	0.11	-0.5
5,271,591	+		CA265_RS21375	0.12	+1.1
5,271,592	-		CA265_RS21375	0.12	-0.4
5,271,605	+		CA265_RS21375	0.13	+0.0
5,271,606	-		CA265_RS21375	0.13	+0.8
5,271,618	-		CA265_RS21375	0.13	-1.2
5,271,702	-		CA265_RS21375	0.17	+0.1
5,271,713	-		CA265_RS21375	0.18	-0.4
5,271,746	+		CA265_RS21375	0.19	-0.2
5,271,783	+		CA265_RS21375	0.21	+0.3
5,271,784	-		CA265_RS21375	0.21	-0.7
5,271,903	+		CA265_RS21375	0.26	+0.3
5,271,932	-		CA265_RS21375	0.27	-0.4
5,272,013	+		CA265_RS21375	0.31	-0.5
5,272,014	-		CA265_RS21375	0.31	-1.0
5,272,023	-		CA265_RS21375	0.31	+0.8
5,272,116	-		CA265_RS21375	0.35	+1.2
5,272,152	-		CA265_RS21375	0.37	-0.2
5,272,165	+		CA265_RS21375	0.37	-0.3
5,272,166	-		CA265_RS21375	0.37	-0.5
5,272,260	-		CA265_RS21375	0.42	-1.0
5,272,285	-		CA265_RS21375	0.43	-1.5
5,272,346	+		CA265_RS21375	0.45	+0.4
5,272,347	-		CA265_RS21375	0.45	+0.3
5,272,359	-		CA265_RS21375	0.46	+0.9
5,272,378	-		CA265_RS21375	0.47	+1.1
5,272,397	+		CA265_RS21375	0.48	+0.4
5,272,436	-		CA265_RS21375	0.49	-0.1
5,272,436	-		CA265_RS21375	0.49	-1.4
5,272,454	+		CA265_RS21375	0.50	-0.2
5,272,485	-		CA265_RS21375	0.51	+0.3
5,272,485	-		CA265_RS21375	0.51	-0.5
5,272,593	+		CA265_RS21375	0.56	+0.2
5,272,593	+		CA265_RS21375	0.56	-0.2
5,272,593	+		CA265_RS21375	0.56	+0.5
5,272,593	+		CA265_RS21375	0.56	+0.5
5,272,594	-		CA265_RS21375	0.56	-1.2
5,272,594	-		CA265_RS21375	0.56	+0.3
5,272,594	-		CA265_RS21375	0.56	-0.1
5,272,650	-		CA265_RS21375	0.59	-0.2
5,272,793	+		CA265_RS21375	0.65	+0.3
5,272,818	+		CA265_RS21375	0.66	-0.2
5,272,819	+		CA265_RS21375	0.66	+0.6
5,272,820	-		CA265_RS21375	0.66	+0.8
5,272,823	+		CA265_RS21375	0.66	+0.8
5,272,885	+		CA265_RS21375	0.69	-0.2
5,272,899	-		CA265_RS21375	0.70	+1.2
5,272,952	+		CA265_RS21375	0.72	+0.3
5,272,953	-		CA265_RS21375	0.72	-0.8
5,272,953	-		CA265_RS21375	0.72	+0.2
5,272,954	+		CA265_RS21375	0.72	-0.2
5,272,954	+		CA265_RS21375	0.72	+0.3
5,272,954	+		CA265_RS21375	0.72	-0.3
5,272,980	-		CA265_RS21375	0.73	+0.4
5,272,986	+		CA265_RS21375	0.73	-0.2
5,273,015	-		CA265_RS21375	0.75	+1.0
5,273,108	+		CA265_RS21375	0.79	-1.8
5,273,205	-		CA265_RS21375	0.83	+0.7
5,273,279	+		CA265_RS21375	0.86	-0.6
5,273,280	-		CA265_RS21375	0.86	-0.2
5,273,365	-				-0.6
5,273,365	-				+0.0
5,273,368	+				-0.0
5,273,411	+				+0.4
5,273,414	+				+0.2
5,273,414	+				-0.7
5,273,417	-				+0.9
5,273,417	-				+0.5
5,273,427	+				-0.3
5,273,517	-				+0.0
5,273,535	-				-0.0
5,273,553	-				-0.7
5,273,573	+				+0.0
5,273,626	-				-0.5
5,273,634	+				+0.6
5,273,686	+				+0.4
5,273,721	-				-1.2
5,273,786	+				-0.4
5,273,786	+				+0.1
5,273,794	-				+0.3
5,273,863	+				+0.9
5,273,864	-				+0.4
5,273,864	-				+0.1
5,273,864	-				-1.3
5,273,867	+				-0.8
5,273,905	-				-0.5
5,273,905	-				-0.5
5,273,946	+				-0.0
5,273,978	+				+0.3
5,274,068	-		CA265_RS21380	0.16	+0.1
5,274,086	+		CA265_RS21380	0.18	+1.5
5,274,108	-		CA265_RS21380	0.19	-1.0
5,274,178	+		CA265_RS21380	0.25	-0.9
5,274,179	-		CA265_RS21380	0.25	+1.2
5,274,222	+		CA265_RS21380	0.29	-0.4
5,274,247	-		CA265_RS21380	0.31	+0.6
5,274,443	+		CA265_RS21380	0.48	+0.7
5,274,445	+		CA265_RS21380	0.48	-0.2
5,274,445	+		CA265_RS21380	0.48	+4.4
5,274,446	-		CA265_RS21380	0.48	+0.9
5,274,446	-		CA265_RS21380	0.48	+0.4
5,274,447	+		CA265_RS21380	0.48	+0.2
5,274,479	+		CA265_RS21380	0.51	+0.8
5,274,479	+		CA265_RS21380	0.51	+0.7
5,274,482	-		CA265_RS21380	0.51	-0.4
5,274,535	+		CA265_RS21380	0.55	+0.1
5,274,536	-		CA265_RS21380	0.55	+1.2