Experiment: R2A with Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS15680 and CA265_RS15685 are separated by 7 nucleotides CA265_RS15685 and CA265_RS15690 are separated by 180 nucleotides CA265_RS15690 and CA265_RS15695 are separated by 442 nucleotides
CA265_RS15680: CA265_RS15680 - chromosome partitioning protein ParB, at 3,952,677 to 3,953,585
_RS15680
CA265_RS15685: CA265_RS15685 - ParA family protein, at 3,953,593 to 3,954,396
_RS15685
CA265_RS15690: CA265_RS15690 - NADPH-dependent FMN reductase, at 3,954,577 to 3,955,098
_RS15690
CA265_RS15695: CA265_RS15695 - hypothetical protein, at 3,955,541 to 3,956,539
_RS15695
Position (kb)
3954
3955
3956 Strain fitness (log2 ratio)
-1
0
1
2 at 3953.630 kb on - strand at 3954.439 kb on - strand at 3954.439 kb on - strand at 3954.469 kb on - strand at 3954.554 kb on - strand at 3954.563 kb on - strand at 3954.573 kb on - strand at 3954.591 kb on - strand at 3954.613 kb on - strand at 3954.637 kb on + strand, within CA265_RS15690 at 3954.637 kb on + strand, within CA265_RS15690 at 3954.638 kb on - strand, within CA265_RS15690 at 3954.705 kb on - strand, within CA265_RS15690 at 3954.705 kb on - strand, within CA265_RS15690 at 3954.724 kb on - strand, within CA265_RS15690 at 3954.771 kb on + strand, within CA265_RS15690 at 3954.795 kb on + strand, within CA265_RS15690 at 3954.846 kb on - strand, within CA265_RS15690 at 3954.893 kb on + strand, within CA265_RS15690 at 3954.894 kb on - strand, within CA265_RS15690 at 3954.894 kb on - strand, within CA265_RS15690 at 3954.912 kb on + strand, within CA265_RS15690 at 3954.935 kb on + strand, within CA265_RS15690 at 3954.961 kb on + strand, within CA265_RS15690 at 3954.962 kb on - strand, within CA265_RS15690 at 3955.008 kb on + strand, within CA265_RS15690 at 3955.089 kb on + strand at 3955.137 kb on + strand at 3955.138 kb on - strand at 3955.138 kb on - strand at 3955.189 kb on - strand at 3955.220 kb on - strand at 3955.259 kb on + strand at 3955.408 kb on - strand at 3955.413 kb on - strand at 3955.452 kb on - strand at 3955.462 kb on - strand at 3955.486 kb on - strand at 3955.498 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cisplatin 0.005 mg/ml remove 3,953,630 - -0.4 3,954,439 - -0.1 3,954,439 - -1.3 3,954,469 - -0.7 3,954,554 - -0.7 3,954,563 - -0.5 3,954,573 - +0.0 3,954,591 - -0.3 3,954,613 - -0.6 3,954,637 + CA265_RS15690 0.11 -0.2 3,954,637 + CA265_RS15690 0.11 +0.3 3,954,638 - CA265_RS15690 0.12 +0.3 3,954,705 - CA265_RS15690 0.25 -1.0 3,954,705 - CA265_RS15690 0.25 +0.6 3,954,724 - CA265_RS15690 0.28 +1.2 3,954,771 + CA265_RS15690 0.37 +0.2 3,954,795 + CA265_RS15690 0.42 -0.6 3,954,846 - CA265_RS15690 0.52 +1.0 3,954,893 + CA265_RS15690 0.61 +0.5 3,954,894 - CA265_RS15690 0.61 +0.2 3,954,894 - CA265_RS15690 0.61 +1.2 3,954,912 + CA265_RS15690 0.64 +0.4 3,954,935 + CA265_RS15690 0.69 +0.2 3,954,961 + CA265_RS15690 0.74 -0.2 3,954,962 - CA265_RS15690 0.74 +2.0 3,955,008 + CA265_RS15690 0.83 +0.6 3,955,089 + +0.4 3,955,137 + -0.5 3,955,138 - +0.6 3,955,138 - +1.0 3,955,189 - +1.2 3,955,220 - -1.1 3,955,259 + +0.8 3,955,408 - +0.6 3,955,413 - -1.3 3,955,452 - +0.1 3,955,462 - +0.5 3,955,486 - -0.5 3,955,498 - -0.5
Or see this region's nucleotide sequence