Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06545

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
1,615,715	+		CA265_RS06540	0.76	-1.7
1,615,716	-		CA265_RS06540	0.76	+0.1
1,615,716	-		CA265_RS06540	0.76	+0.0
1,615,794	+		CA265_RS06540	0.80	-0.3
1,615,843	+		CA265_RS06540	0.82	+0.4
1,615,860	-		CA265_RS06540	0.83	-0.6
1,615,903	-		CA265_RS06540	0.85	-0.8
1,615,912	+		CA265_RS06540	0.86	+0.4
1,615,937	-		CA265_RS06540	0.87	-1.1
1,615,994	+		CA265_RS06540	0.90	+0.4
1,615,995	-				-0.3
1,615,995	-				-0.1
1,616,002	-				-1.3
1,616,034	+				+0.1
1,616,039	+				+0.6
1,616,063	-				-0.5
1,616,088	-				-0.2
1,616,303	-				-1.2
1,616,303	-				-0.0
1,616,303	-				-0.8
1,616,348	-				-0.5
1,616,349	+				+0.2
1,616,380	-				-1.1
1,616,403	-				-0.3
1,616,412	-				+0.1
1,616,492	-				+0.3
1,616,549	-				-0.3
1,616,631	-				-1.7
1,616,684	+				-1.0
1,616,684	+				-1.6
1,616,752	-		CA265_RS06545	0.11	-0.2
1,617,003	-		CA265_RS06545	0.30	-1.6
1,617,174	-		CA265_RS06545	0.43	-1.4
1,617,180	-		CA265_RS06545	0.43	-1.6
1,617,377	+		CA265_RS06545	0.58	-0.8
1,617,469	+		CA265_RS06545	0.65	-0.6
1,617,470	-		CA265_RS06545	0.65	-0.3
1,617,470	-		CA265_RS06545	0.65	-1.7
1,617,476	-		CA265_RS06545	0.66	-2.3
1,617,481	-		CA265_RS06545	0.66	-0.6
1,617,482	+		CA265_RS06545	0.66	-1.4
1,617,523	-		CA265_RS06545	0.69	-1.1
1,617,551	+		CA265_RS06545	0.71	-0.8
1,617,577	+		CA265_RS06545	0.73	-0.6
1,617,578	-		CA265_RS06545	0.73	-1.4
1,617,657	+		CA265_RS06545	0.79	-0.5
1,617,658	-		CA265_RS06545	0.79	-0.6
1,617,659	+		CA265_RS06545	0.79	-0.8
1,617,678	+		CA265_RS06545	0.81	-1.2
1,617,680	+		CA265_RS06545	0.81	-0.1
1,617,680	+		CA265_RS06545	0.81	+0.1
1,617,707	-		CA265_RS06545	0.83	-1.5
1,617,746	+		CA265_RS06545	0.86	-1.7
1,617,921	+				-0.0
1,617,940	-				-0.8
1,617,956	+				-1.0
1,617,973	+				-0.5
1,618,032	+				-0.3
1,618,048	+				-1.5
1,618,065	+				-1.4
1,618,088	-				-0.3
1,618,123	+				-1.0
1,618,183	+				+0.5
1,618,184	-				-0.5
1,618,193	+				+2.6
1,618,193	+				-1.1
1,618,193	+				-0.5
1,618,194	-				+0.5
1,618,307	+		CA265_RS06550	0.12	-0.2
1,618,308	-		CA265_RS06550	0.12	-0.8
1,618,309	+		CA265_RS06550	0.13	-1.7
1,618,344	+		CA265_RS06550	0.14	-0.4
1,618,344	+		CA265_RS06550	0.14	-0.1
1,618,347	+		CA265_RS06550	0.14	+0.1
1,618,348	-		CA265_RS06550	0.14	-1.2
1,618,355	-		CA265_RS06550	0.14	-1.3
1,618,455	+		CA265_RS06550	0.17	-0.3
1,618,462	+		CA265_RS06550	0.18	-2.2
1,618,488	-		CA265_RS06550	0.18	-0.6
1,618,518	+		CA265_RS06550	0.19	-0.6
1,618,519	-		CA265_RS06550	0.19	-1.1
1,618,522	+		CA265_RS06550	0.20	-0.5
1,618,523	-		CA265_RS06550	0.20	-0.5
1,618,523	-		CA265_RS06550	0.20	-0.6
1,618,703	+		CA265_RS06550	0.26	-0.9
1,618,726	+		CA265_RS06550	0.26	-0.5
1,618,786	+		CA265_RS06550	0.28	-1.1
1,618,834	+		CA265_RS06550	0.30	-1.9
1,618,865	+		CA265_RS06550	0.31	-1.4
1,618,866	-		CA265_RS06550	0.31	+0.1
1,618,866	-		CA265_RS06550	0.31	-0.9
1,618,870	+		CA265_RS06550	0.31	-0.3
1,618,871	-		CA265_RS06550	0.31	+1.1
1,618,871	-		CA265_RS06550	0.31	-0.9
1,618,875	+		CA265_RS06550	0.31	+0.7
1,618,880	+		CA265_RS06550	0.31	-0.9
1,618,904	+		CA265_RS06550	0.32	-1.7