Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04805

Experiment: R2A with Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cisplatin 0.005 mg/ml
1,143,788	-		CA265_RS04800	0.31	+0.8
1,143,792	+		CA265_RS04800	0.31	+1.3
1,143,799	+		CA265_RS04800	0.32	-0.2
1,143,823	-		CA265_RS04800	0.34	+0.5
1,143,823	-		CA265_RS04800	0.34	+0.4
1,143,851	-		CA265_RS04800	0.36	+0.8
1,143,854	-		CA265_RS04800	0.37	-0.2
1,143,854	-		CA265_RS04800	0.37	-2.1
1,143,854	-		CA265_RS04800	0.37	+0.4
1,143,890	-		CA265_RS04800	0.40	+0.0
1,143,962	+		CA265_RS04800	0.46	+0.7
1,143,963	-		CA265_RS04800	0.46	+0.2
1,144,087	+		CA265_RS04800	0.58	+0.8
1,144,087	+		CA265_RS04800	0.58	-0.6
1,144,087	+		CA265_RS04800	0.58	+0.6
1,144,087	+		CA265_RS04800	0.58	+0.6
1,144,114	+		CA265_RS04800	0.60	-0.5
1,144,362	+		CA265_RS04800	0.83	-0.5
1,144,363	-		CA265_RS04800	0.83	+0.4
1,144,363	-		CA265_RS04800	0.83	+0.2
1,144,369	+		CA265_RS04800	0.84	-1.2
1,144,369	+		CA265_RS04800	0.84	+0.5
1,144,373	-		CA265_RS04800	0.84	+1.3
1,144,458	+				-0.4
1,144,480	-				+0.2
1,144,484	-				+0.6
1,144,484	-				-0.0
1,144,489	-				-0.6
1,144,511	-				+0.9
1,144,553	-				-0.5
1,144,642	-				-0.3
1,144,739	+				-1.2
1,144,816	-		CA265_RS04805	0.10	+0.2
1,144,842	-		CA265_RS04805	0.14	+0.4
1,144,989	-		CA265_RS04805	0.32	+0.5
1,145,007	-		CA265_RS04805	0.34	+0.5
1,145,011	+		CA265_RS04805	0.34	+0.6
1,145,022	+		CA265_RS04805	0.36	+1.8
1,145,038	+		CA265_RS04805	0.37	+0.6
1,145,055	+		CA265_RS04805	0.40	+0.2
1,145,065	-		CA265_RS04805	0.41	-0.0
1,145,065	-		CA265_RS04805	0.41	-0.2
1,145,170	+		CA265_RS04805	0.54	+0.7
1,145,172	+		CA265_RS04805	0.54	-0.6
1,145,172	+		CA265_RS04805	0.54	+1.6
1,145,173	-		CA265_RS04805	0.54	+0.1
1,145,199	+		CA265_RS04805	0.57	+0.2
1,145,261	+		CA265_RS04805	0.65	-0.6
1,145,334	+		CA265_RS04805	0.74	+0.4
1,145,342	+		CA265_RS04805	0.75	-0.3
1,145,438	+		CA265_RS04805	0.86	+0.5
1,145,484	+				-0.8
1,145,530	-				+1.1
1,145,552	-				+0.0
1,145,579	-				-0.9
1,145,640	+		CA265_RS04810	0.23	-0.0
1,145,698	+		CA265_RS04810	0.39	-0.2
1,145,698	+		CA265_RS04810	0.39	+0.4
1,145,698	+		CA265_RS04810	0.39	+0.2
1,145,698	+		CA265_RS04810	0.39	+0.1
1,145,728	-		CA265_RS04810	0.47	+0.3
1,145,756	-		CA265_RS04810	0.55	+0.4
1,145,756	-		CA265_RS04810	0.55	+0.0
1,145,756	-		CA265_RS04810	0.55	+0.2
1,145,776	+		CA265_RS04810	0.60	+0.1
1,145,869	+		CA265_RS04810	0.86	-0.8
1,146,003	-				+0.4
1,146,062	+				-0.5
1,146,087	-				-2.4
1,146,120	-				-0.2
1,146,149	-				-0.1
1,146,157	+				+1.0
1,146,158	-				-0.6
1,146,177	+				-1.1
1,146,177	+				-0.3
1,146,248	+				+1.2
1,146,408	+		CA265_RS04815	0.67	-1.1
1,146,409	-		CA265_RS04815	0.67	-0.2
1,146,428	+		CA265_RS04815	0.75	-0.5
1,146,461	+		CA265_RS04815	0.87	+0.3
1,146,462	-		CA265_RS04815	0.88	-1.2
1,146,522	+				+0.5
1,146,523	-				+0.5