Experiment: R2A with Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03525 and CA265_RS03530 are separated by 106 nucleotides CA265_RS03530 and CA265_RS03535 are separated by 70 nucleotides CA265_RS03535 and CA265_RS03540 are separated by 52 nucleotides
CA265_RS03525: CA265_RS03525 - hypothetical protein, at 848,383 to 849,213
_RS03525
CA265_RS03530: CA265_RS03530 - hypothetical protein, at 849,320 to 849,709
_RS03530
CA265_RS03535: CA265_RS03535 - septum formation protein Maf, at 849,780 to 850,346
_RS03535
CA265_RS03540: CA265_RS03540 - hypothetical protein, at 850,399 to 851,076
_RS03540
Position (kb) 849
850 Strain fitness (log2 ratio) -2
-1
0
1
2 at 848.392 kb on + strand at 848.392 kb on + strand at 848.399 kb on + strand at 848.440 kb on + strand at 848.441 kb on - strand at 848.501 kb on - strand, within CA265_RS03525 at 848.541 kb on - strand, within CA265_RS03525 at 848.551 kb on - strand, within CA265_RS03525 at 848.712 kb on - strand at 848.884 kb on - strand, within CA265_RS03525 at 849.031 kb on + strand, within CA265_RS03525 at 849.038 kb on - strand, within CA265_RS03525 at 849.143 kb on + strand at 849.143 kb on + strand at 849.236 kb on - strand at 849.236 kb on - strand at 849.282 kb on + strand at 849.359 kb on - strand, within CA265_RS03530 at 849.361 kb on - strand, within CA265_RS03530 at 849.480 kb on + strand, within CA265_RS03530 at 849.550 kb on + strand, within CA265_RS03530 at 849.616 kb on - strand, within CA265_RS03530 at 849.708 kb on - strand at 849.728 kb on + strand at 849.827 kb on + strand at 849.884 kb on - strand, within CA265_RS03535 at 849.930 kb on + strand, within CA265_RS03535 at 849.983 kb on + strand, within CA265_RS03535 at 849.997 kb on + strand, within CA265_RS03535 at 849.998 kb on - strand, within CA265_RS03535 at 850.037 kb on + strand, within CA265_RS03535 at 850.060 kb on + strand, within CA265_RS03535 at 850.103 kb on - strand, within CA265_RS03535 at 850.137 kb on + strand, within CA265_RS03535 at 850.155 kb on + strand, within CA265_RS03535 at 850.191 kb on + strand, within CA265_RS03535 at 850.191 kb on + strand, within CA265_RS03535 at 850.192 kb on - strand, within CA265_RS03535 at 850.203 kb on + strand at 850.258 kb on + strand, within CA265_RS03535 at 850.264 kb on + strand, within CA265_RS03535 at 850.286 kb on + strand, within CA265_RS03535 at 850.287 kb on - strand, within CA265_RS03535 at 850.422 kb on + strand at 850.422 kb on + strand at 850.423 kb on - strand at 850.443 kb on - strand at 850.527 kb on + strand, within CA265_RS03540 at 850.527 kb on + strand, within CA265_RS03540 at 850.528 kb on - strand, within CA265_RS03540 at 850.528 kb on - strand, within CA265_RS03540 at 850.528 kb on - strand, within CA265_RS03540 at 850.615 kb on + strand, within CA265_RS03540 at 850.660 kb on + strand, within CA265_RS03540
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Cisplatin 0.005 mg/ml remove 848,392 + -0.0 848,392 + +0.2 848,399 + +0.1 848,440 + -0.5 848,441 - -0.4 848,501 - CA265_RS03525 0.14 +0.0 848,541 - CA265_RS03525 0.19 -0.2 848,551 - CA265_RS03525 0.20 -1.0 848,712 - -1.0 848,884 - CA265_RS03525 0.60 +0.5 849,031 + CA265_RS03525 0.78 +2.3 849,038 - CA265_RS03525 0.79 +0.2 849,143 + -0.4 849,143 + +0.0 849,236 - +1.0 849,236 - -0.6 849,282 + -0.4 849,359 - CA265_RS03530 0.10 +0.7 849,361 - CA265_RS03530 0.11 +0.7 849,480 + CA265_RS03530 0.41 +0.3 849,550 + CA265_RS03530 0.59 +0.5 849,616 - CA265_RS03530 0.76 -0.1 849,708 - +0.3 849,728 + -0.6 849,827 + -0.8 849,884 - CA265_RS03535 0.18 +0.0 849,930 + CA265_RS03535 0.26 +0.6 849,983 + CA265_RS03535 0.36 -0.1 849,997 + CA265_RS03535 0.38 +1.3 849,998 - CA265_RS03535 0.38 +0.3 850,037 + CA265_RS03535 0.45 +1.0 850,060 + CA265_RS03535 0.49 -0.4 850,103 - CA265_RS03535 0.57 +0.3 850,137 + CA265_RS03535 0.63 +1.3 850,155 + CA265_RS03535 0.66 -0.2 850,191 + CA265_RS03535 0.72 -0.1 850,191 + CA265_RS03535 0.72 -0.8 850,192 - CA265_RS03535 0.73 -0.2 850,203 + +0.6 850,258 + CA265_RS03535 0.84 -0.5 850,264 + CA265_RS03535 0.85 +1.3 850,286 + CA265_RS03535 0.89 +0.3 850,287 - CA265_RS03535 0.89 -0.6 850,422 + +0.4 850,422 + -2.0 850,423 - -0.4 850,443 - +0.2 850,527 + CA265_RS03540 0.19 +1.2 850,527 + CA265_RS03540 0.19 -1.7 850,528 - CA265_RS03540 0.19 +0.1 850,528 - CA265_RS03540 0.19 +0.2 850,528 - CA265_RS03540 0.19 -0.5 850,615 + CA265_RS03540 0.32 +0.6 850,660 + CA265_RS03540 0.38 +0.0
Or see this region's nucleotide sequence