Experiment: Nickel (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_934 and Ac3H11_935 are separated by 122 nucleotides Ac3H11_935 and Ac3H11_936 are separated by 102 nucleotides Ac3H11_936 and Ac3H11_937 are separated by 126 nucleotides
Ac3H11_934 - Cell division trigger factor (EC 5.2.1.8), at 51,429 to 52,742
_934
Ac3H11_935 - ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92), at 52,865 to 53,473
_935
Ac3H11_936 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 53,576 to 54,841
_936
Ac3H11_937 - ATP-dependent protease La (EC 3.4.21.53) Type I, at 54,968 to 57,400
_937
Position (kb) 53
54
55 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 52.576 kb on - strand, within Ac3H11_934 at 52.576 kb on - strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.838 kb on + strand at 52.839 kb on - strand at 52.843 kb on + strand at 53.525 kb on + strand at 54.898 kb on + strand at 54.899 kb on - strand at 54.979 kb on + strand at 54.979 kb on + strand at 54.980 kb on - strand at 54.980 kb on - strand at 54.980 kb on - strand at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.603 kb on + strand, within Ac3H11_937 at 55.667 kb on + strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.6 mM remove 52,576 - Ac3H11_934 0.87 +1.8 52,576 - Ac3H11_934 0.87 +1.2 52,605 + Ac3H11_934 0.89 +2.1 52,605 + Ac3H11_934 0.89 +1.1 52,605 + Ac3H11_934 0.89 +0.6 52,605 + Ac3H11_934 0.89 +0.9 52,605 + Ac3H11_934 0.89 +1.2 52,606 - Ac3H11_934 0.90 +1.3 52,606 - Ac3H11_934 0.90 +0.9 52,838 + -1.2 52,839 - -1.7 52,843 + -1.2 53,525 + -2.3 54,898 + -0.7 54,899 - +0.3 54,979 + -0.8 54,979 + -1.5 54,980 - -2.3 54,980 - -1.1 54,980 - -1.4 55,403 + Ac3H11_937 0.18 -3.4 55,403 + Ac3H11_937 0.18 -2.9 55,403 + Ac3H11_937 0.18 -1.6 55,403 + Ac3H11_937 0.18 -0.4 55,403 + Ac3H11_937 0.18 -2.4 55,404 - Ac3H11_937 0.18 -1.9 55,404 - Ac3H11_937 0.18 -1.1 55,404 - Ac3H11_937 0.18 +1.0 55,603 + Ac3H11_937 0.26 -2.3 55,667 + Ac3H11_937 0.29 -0.2 55,668 - Ac3H11_937 0.29 -0.5 55,668 - Ac3H11_937 0.29 -1.1 55,668 - Ac3H11_937 0.29 -1.2
Or see this region's nucleotide sequence