Experiment: Nickel (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3026 and Ac3H11_3027 are separated by 160 nucleotides Ac3H11_3027 and Ac3H11_3028 are separated by 54 nucleotides Ac3H11_3028 and Ac3H11_3029 are separated by 82 nucleotides Ac3H11_3029 and Ac3H11_3030 are separated by 42 nucleotides
Ac3H11_3026 - Excinuclease ABC subunit A, dimeric form, at 48,309 to 54,182
_3026
Ac3H11_3027 - FIG00347480: hypothetical protein, at 54,343 to 54,849
_3027
Ac3H11_3028 - hypothetical protein, at 54,904 to 55,047
_3028
Ac3H11_3029 - Ferredoxin, at 55,130 to 55,447
_3029
Ac3H11_3030 - Amidinotransferase family protein, at 55,490 to 56,500
_3030
Position (kb) 54
55
56 Strain fitness (log2 ratio) -2
-1
0
1 at 53.916 kb on + strand at 53.916 kb on + strand at 53.916 kb on + strand at 53.916 kb on + strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 54.233 kb on + strand at 54.233 kb on + strand at 54.281 kb on + strand at 54.281 kb on + strand at 54.282 kb on - strand at 54.282 kb on - strand at 54.282 kb on - strand at 54.282 kb on - strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.372 kb on + strand at 54.372 kb on + strand at 55.295 kb on + strand, within Ac3H11_3029 at 55.295 kb on + strand, within Ac3H11_3029 at 55.446 kb on - strand at 55.471 kb on - strand at 55.474 kb on + strand at 55.474 kb on + strand at 55.475 kb on - strand at 55.878 kb on + strand, within Ac3H11_3030 at 55.879 kb on - strand, within Ac3H11_3030 at 55.879 kb on - strand, within Ac3H11_3030 at 55.926 kb on + strand, within Ac3H11_3030 at 55.927 kb on - strand, within Ac3H11_3030 at 55.989 kb on + strand, within Ac3H11_3030 at 55.989 kb on + strand, within Ac3H11_3030 at 55.989 kb on + strand, within Ac3H11_3030 at 55.989 kb on + strand, within Ac3H11_3030 at 55.989 kb on + strand, within Ac3H11_3030 at 55.990 kb on - strand, within Ac3H11_3030 at 55.990 kb on - strand, within Ac3H11_3030
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.6 mM remove 53,916 + -1.0 53,916 + +1.1 53,916 + -0.9 53,916 + -1.9 53,917 - +1.4 53,917 - -0.2 53,917 - -1.0 53,917 - +0.6 53,917 - +0.1 53,917 - -0.6 53,917 - +0.1 53,917 - +0.9 53,917 - -0.2 53,917 - -0.5 54,233 + +0.7 54,233 + +0.2 54,281 + +0.4 54,281 + +0.7 54,282 - +0.0 54,282 - +0.5 54,282 - -0.6 54,282 - +0.0 54,348 + -0.7 54,348 + -0.2 54,348 + +0.5 54,348 + +0.5 54,348 + +0.4 54,348 + -0.7 54,349 - -1.2 54,349 - -0.0 54,349 - -0.4 54,349 - +0.9 54,349 - -0.4 54,349 - +0.9 54,349 - +0.6 54,372 + -0.2 54,372 + +0.5 55,295 + Ac3H11_3029 0.52 -0.4 55,295 + Ac3H11_3029 0.52 -0.7 55,446 - +0.4 55,471 - -0.5 55,474 + +0.1 55,474 + -1.2 55,475 - +0.2 55,878 + Ac3H11_3030 0.38 -0.2 55,879 - Ac3H11_3030 0.38 -0.5 55,879 - Ac3H11_3030 0.38 -0.3 55,926 + Ac3H11_3030 0.43 +0.5 55,927 - Ac3H11_3030 0.43 -0.1 55,989 + Ac3H11_3030 0.49 +0.2 55,989 + Ac3H11_3030 0.49 -1.6 55,989 + Ac3H11_3030 0.49 +0.9 55,989 + Ac3H11_3030 0.49 -2.4 55,989 + Ac3H11_3030 0.49 +0.7 55,990 - Ac3H11_3030 0.49 -1.2 55,990 - Ac3H11_3030 0.49 +0.2
Or see this region's nucleotide sequence