Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001705

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,915,523	-				+3.1
1,915,652	+				-0.3
1,915,652	+				+2.0
1,915,652	+				+2.2
1,915,653	-				+1.2
1,915,653	-				-0.4
1,915,905	+		ABIE53_001704	0.79	+2.8
1,915,906	-		ABIE53_001704	0.79	-0.8
1,915,914	+		ABIE53_001704	0.82	+0.4
1,916,044	+				+0.2
1,916,045	-				-0.9
1,916,045	-				-1.6
1,916,045	-				+0.2
1,916,045	-				+0.9
1,916,045	-				+0.5
1,916,257	+				-0.5
1,916,258	-				-0.4
1,916,582	-				-1.3
1,916,582	-				-0.4
1,916,691	+		ABIE53_001705	0.21	-0.1
1,916,691	+		ABIE53_001705	0.21	+0.6
1,916,691	+		ABIE53_001705	0.21	-2.1
1,916,691	+		ABIE53_001705	0.21	-0.5
1,916,691	+		ABIE53_001705	0.21	-1.4
1,916,692	-		ABIE53_001705	0.22	-2.1
1,916,692	-		ABIE53_001705	0.22	-1.6
1,916,692	-		ABIE53_001705	0.22	-1.4
1,916,692	-		ABIE53_001705	0.22	-1.6
1,916,692	-		ABIE53_001705	0.22	-0.8
1,916,694	+		ABIE53_001705	0.22	-0.3
1,916,694	+		ABIE53_001705	0.22	+0.7
1,916,694	+		ABIE53_001705	0.22	+5.2
1,917,003	+		ABIE53_001705	0.56	-0.2
1,917,003	+		ABIE53_001705	0.56	+0.2
1,917,004	-		ABIE53_001705	0.56	+0.1
1,917,004	-		ABIE53_001705	0.56	+1.2
1,917,066	+		ABIE53_001705	0.63	+1.4
1,917,066	+		ABIE53_001705	0.63	-1.3
1,917,066	+		ABIE53_001705	0.63	+0.0
1,917,066	+		ABIE53_001705	0.63	-1.0
1,917,066	+		ABIE53_001705	0.63	-0.4
1,917,066	+		ABIE53_001705	0.63	-2.3
1,917,066	+		ABIE53_001705	0.63	-1.1
1,917,066	+		ABIE53_001705	0.63	-0.6
1,917,066	+		ABIE53_001705	0.63	-0.6
1,917,066	+		ABIE53_001705	0.63	+0.2
1,917,066	+		ABIE53_001705	0.63	-1.4
1,917,066	+		ABIE53_001705	0.63	-1.4
1,917,066	+		ABIE53_001705	0.63	-0.8
1,917,066	+		ABIE53_001705	0.63	-0.6
1,917,066	+		ABIE53_001705	0.63	-0.6
1,917,066	+		ABIE53_001705	0.63	+0.1
1,917,066	+		ABIE53_001705	0.63	+4.0
1,917,066	+		ABIE53_001705	0.63	-0.5
1,917,066	+		ABIE53_001705	0.63	-2.0
1,917,066	+		ABIE53_001705	0.63	-0.4
1,917,067	-		ABIE53_001705	0.63	+2.2
1,917,067	-		ABIE53_001705	0.63	+1.2
1,917,067	-		ABIE53_001705	0.63	-0.2
1,917,067	-		ABIE53_001705	0.63	+0.9
1,917,067	-		ABIE53_001705	0.63	+0.3
1,917,067	-		ABIE53_001705	0.63	-0.6
1,917,067	-		ABIE53_001705	0.63	+2.2
1,917,067	-		ABIE53_001705	0.63	-0.4
1,917,067	-		ABIE53_001705	0.63	-0.2
1,917,067	-		ABIE53_001705	0.63	-1.0
1,917,067	-		ABIE53_001705	0.63	+0.9
1,917,067	-		ABIE53_001705	0.63	-0.3
1,917,067	-		ABIE53_001705	0.63	-1.1
1,917,067	-		ABIE53_001705	0.63	-0.0
1,917,125	+		ABIE53_001705	0.70	-0.2
1,917,125	+		ABIE53_001705	0.70	-1.0
1,917,125	+		ABIE53_001705	0.70	-1.5
1,917,125	+		ABIE53_001705	0.70	-0.1
1,917,125	+		ABIE53_001705	0.70	-0.1
1,917,126	-		ABIE53_001705	0.70	+0.3
1,917,175	-		ABIE53_001705	0.75	+2.2
1,917,175	-		ABIE53_001705	0.75	-0.9
1,917,175	-		ABIE53_001705	0.75	+0.3
1,917,175	-		ABIE53_001705	0.75	-1.3
1,917,310	-				-1.1
1,917,393	+				-0.8
1,917,393	+				+0.8
1,917,458	-				-0.6
1,917,459	+				+2.2
1,917,459	+				-0.3
1,917,459	+				+4.1
1,917,459	+				+0.6
1,917,460	-				-1.4
1,917,460	-				-0.4
1,917,460	-				-0.6
1,917,460	-				-0.4
1,917,460	-				+0.3
1,917,463	+				+0.0
1,917,463	+				+0.0
1,917,464	-				-1.0
1,917,465	+				+3.4
1,917,465	+				-0.8
1,917,465	+				+0.6
1,917,465	+				-1.3
1,917,465	+				-1.5
1,917,466	-				+0.1
1,917,466	-				-0.8
1,917,466	-				-0.4
1,917,470	+				-0.4
1,917,470	+				+0.3
1,917,471	-				+0.2
1,917,471	-				-2.1
1,917,471	-				-0.9
1,917,471	-				-0.1
1,917,471	-				-0.3
1,917,471	-				-0.4
1,917,472	+				-0.4
1,917,473	-				-1.1
1,917,473	-				+0.5
1,917,473	-				+1.5
1,917,473	-				-2.0
1,917,604	+				-0.8
1,917,605	-				-0.4
1,917,731	+				-1.1
1,917,731	+				-0.6
1,917,732	-				-0.1
1,917,752	+				+0.9
1,917,752	+				+0.7
1,917,752	+				+1.5
1,917,753	-				-2.2
1,917,753	-				-0.0
1,917,753	-				+1.9
1,917,753	-				-1.6
1,917,767	-				-0.8
1,917,773	+				-0.0
1,917,773	+				+0.2
1,917,774	-				+1.6
1,917,929	+				-0.2
1,917,929	+				-2.1
1,917,929	+				-0.7
1,917,929	+				+0.8
1,917,930	-				+0.2
1,917,930	-				+1.2
1,917,930	-				-1.3
1,918,001	+				-0.7
1,918,002	-				-1.0
1,918,002	-				+3.2
1,918,002	-				-0.7
1,918,002	-				+0.1
1,918,121	+				-1.8
1,918,122	-				-0.4
1,918,123	+				+2.2
1,918,123	+				-1.2
1,918,123	+				-0.1
1,918,123	+				-0.8
1,918,124	-				-0.6
1,918,124	-				-2.2
1,918,279	+		ABIE53_001706	0.12	+0.6
1,918,279	+		ABIE53_001706	0.12	-3.3
1,918,279	+		ABIE53_001706	0.12	-1.3
1,918,280	-		ABIE53_001706	0.12	-0.5
1,918,280	-		ABIE53_001706	0.12	-0.2
1,918,280	-		ABIE53_001706	0.12	-1.4
1,918,280	-		ABIE53_001706	0.12	-1.6
1,918,280	-		ABIE53_001706	0.12	-1.7
1,918,280	-		ABIE53_001706	0.12	-2.3
1,918,283	+		ABIE53_001706	0.12	-0.1
1,918,283	+		ABIE53_001706	0.12	+0.2
1,918,283	+		ABIE53_001706	0.12	+0.2
1,918,283	+		ABIE53_001706	0.12	-0.1
1,918,283	+		ABIE53_001706	0.12	-0.3
1,918,283	+		ABIE53_001706	0.12	-2.3
1,918,283	+		ABIE53_001706	0.12	+1.0
1,918,283	+		ABIE53_001706	0.12	-0.7
1,918,283	+		ABIE53_001706	0.12	+3.8
1,918,283	+		ABIE53_001706	0.12	-1.0
1,918,284	-		ABIE53_001706	0.12	+1.8
1,918,284	-		ABIE53_001706	0.12	+0.1
1,918,284	-		ABIE53_001706	0.12	-1.0
1,918,284	-		ABIE53_001706	0.12	+1.0
1,918,284	-		ABIE53_001706	0.12	+0.2
1,918,284	-		ABIE53_001706	0.12	-0.1
1,918,284	-		ABIE53_001706	0.12	-0.5
1,918,284	-		ABIE53_001706	0.12	-0.5
1,918,372	+		ABIE53_001706	0.14	-0.4
1,918,372	+		ABIE53_001706	0.14	+0.2
1,918,372	+		ABIE53_001706	0.14	-0.1
1,918,373	-		ABIE53_001706	0.14	-0.8