Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10265

Experiment: Growth at 25C; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at 25C; with MOPS
2,263,026	+		PFLU_RS10260	0.84	+0.8
2,263,026	+		PFLU_RS10260	0.84	-2.3
2,263,026	+		PFLU_RS10260	0.84	+1.4
2,263,027	-		PFLU_RS10260	0.84	-0.2
2,263,027	-		PFLU_RS10260	0.84	-1.2
2,263,051	+		PFLU_RS10260	0.86	-2.7
2,263,052	-		PFLU_RS10260	0.86	+0.1
2,263,052	-		PFLU_RS10260	0.86	+0.5
2,263,052	-		PFLU_RS10260	0.86	-0.3
2,263,148	+				-3.4
2,263,184	+				+0.8
2,263,184	+				-1.1
2,263,184	+				-1.6
2,263,185	-				+2.6
2,263,185	-				-0.1
2,263,185	-				+0.4
2,263,185	-				-0.6
2,263,185	-				+2.3
2,263,243	+				+0.2
2,263,243	+				-1.6
2,263,243	+				-0.1
2,263,243	+				+0.5
2,263,244	-				-0.0
2,263,244	-				+0.9
2,263,244	-				+0.3
2,263,252	+				-0.6
2,263,252	+				+2.1
2,263,252	+				+0.1
2,263,252	+				+0.4
2,263,253	-				-2.2
2,263,253	-				+0.6
2,263,253	-				+0.5
2,263,253	-				-1.0
2,263,253	-				+0.3
2,263,254	+				+0.8
2,263,254	+				+1.4
2,263,254	+				-2.5
2,263,254	+				-1.6
2,263,254	+				-1.2
2,263,254	+				+0.6
2,263,254	+				-0.2
2,263,254	+				+1.7
2,263,254	+				-0.1
2,263,254	+				-3.2
2,263,254	+				-0.3
2,263,254	+				-1.6
2,263,255	-				-0.6
2,263,255	-				+0.1
2,263,255	-				-1.0
2,263,255	-				+0.5
2,263,255	-				+0.4
2,263,255	-				+1.4
2,263,255	-				+1.0
2,263,255	-				+0.2
2,263,255	-				+1.0
2,263,255	-				+0.2
2,263,255	-				+0.0
2,263,255	-				-2.5
2,263,255	-				+0.9
2,263,255	-				-0.0
2,263,255	-				+1.1
2,263,255	-				+2.6
2,263,322	+				+0.7
2,263,343	-				+1.9
2,263,354	+				-2.5
2,263,354	+				-0.6
2,263,354	+				+0.1
2,263,355	-				-0.2
2,263,355	-				-2.1
2,263,382	+				+0.6
2,263,382	+				+0.8
2,263,383	-				-2.3
2,263,394	+				+3.4
2,263,394	+				-0.5
2,263,395	-				+1.8
2,263,395	-				-0.1
2,263,395	-				-0.6
2,263,429	-				+2.0
2,263,445	+				-1.8
2,263,446	-				+0.4
2,263,488	+				-0.8
2,263,488	+				-0.9
2,263,489	-				+3.4
2,263,489	-				-0.5
2,263,492	+				-3.0
2,263,492	+				+0.9
2,263,493	-				+1.4
2,263,571	+				+1.0
2,263,571	+				+2.0
2,263,571	+				-1.2
2,263,572	-				+0.2
2,263,572	-				-0.6
2,263,599	+				+0.7
2,263,600	-				+0.2
2,263,600	-				+0.2
2,263,627	+				-1.2
2,263,628	-				+0.0
2,263,665	+				-0.2
2,263,665	+				-0.6
2,263,665	+				-2.0
2,263,665	+				-0.1
2,263,665	+				+0.0
2,263,666	-				-0.6
2,263,666	-				+0.0
2,263,742	-		PFLU_RS31520	0.33	+0.0
2,263,742	-		PFLU_RS31520	0.33	-0.6
2,263,777	+		PFLU_RS31520	0.60	-2.0
2,263,777	+		PFLU_RS31520	0.60	-0.4
2,263,777	+		PFLU_RS31520	0.60	+0.6
2,263,777	+		PFLU_RS31520	0.60	+0.6
2,263,777	+		PFLU_RS31520	0.60	+1.8
2,263,777	+		PFLU_RS31520	0.60	+2.1
2,263,778	-		PFLU_RS31520	0.61	-1.0
2,263,778	-		PFLU_RS31520	0.61	+0.1
2,263,778	-		PFLU_RS31520	0.61	-2.0
2,263,778	-		PFLU_RS31520	0.61	+0.2
2,263,778	-		PFLU_RS31520	0.61	+0.1
2,263,778	-		PFLU_RS31520	0.61	+0.8
2,263,781	-		PFLU_RS31520	0.63	+1.1
2,263,781	-		PFLU_RS31520	0.63	-2.0
2,263,781	-		PFLU_RS31520	0.63	-0.1
2,263,781	-		PFLU_RS31520	0.63	-1.7
2,263,845	+				-1.2
2,263,845	+				-1.8
2,263,846	-				+0.9
2,263,846	-				-1.5
2,263,846	-				+0.9
2,263,846	-				+1.5
2,263,849	+				-0.7
2,263,849	+				-1.0
2,263,850	-				+1.4
2,263,850	-				-2.0
2,263,850	-				-1.5
2,263,850	-				+1.8
2,263,852	+				+1.4
2,263,883	-				-1.3
2,263,911	+				-0.7
2,263,911	+				+0.8
2,263,911	+				+0.4
2,263,911	+				+0.7
2,263,911	+				+1.4
2,263,911	+				-0.0
2,263,912	-				+0.9
2,263,912	-				+1.4
2,263,912	-				-2.6
2,263,912	-				-2.9
2,263,912	-				+0.4
2,263,912	-				-0.4
2,263,912	-				+1.4
2,263,912	-				+0.5
2,263,912	-				+0.4
2,263,912	-				-1.8
2,263,950	+				-1.4
2,263,950	+				-2.1
2,263,950	+				+0.5
2,263,950	+				-1.1
2,263,951	-				-0.2
2,264,231	+		PFLU_RS10265	0.39	-0.7
2,264,231	+		PFLU_RS10265	0.39	-1.1
2,264,232	-		PFLU_RS10265	0.39	+0.3
2,264,232	-		PFLU_RS10265	0.39	+0.9
2,264,232	-		PFLU_RS10265	0.39	-2.0
2,264,232	-		PFLU_RS10265	0.39	+0.6
2,264,232	-		PFLU_RS10265	0.39	-0.2
2,264,232	-		PFLU_RS10265	0.39	-1.8
2,264,232	-		PFLU_RS10265	0.39	+0.3
2,264,232	-		PFLU_RS10265	0.39	-0.0
2,264,232	-		PFLU_RS10265	0.39	+0.3
2,264,232	-		PFLU_RS10265	0.39	-0.3
2,264,338	+		PFLU_RS10265	0.56	+1.3
2,264,338	+		PFLU_RS10265	0.56	-1.0
2,264,338	+		PFLU_RS10265	0.56	-2.4
2,264,339	-		PFLU_RS10265	0.56	+1.2
2,264,395	-		PFLU_RS10265	0.65	+1.0
2,264,466	+		PFLU_RS10265	0.76	-1.2
2,264,466	+		PFLU_RS10265	0.76	+0.1
2,264,466	+		PFLU_RS10265	0.76	+1.0
2,264,466	+		PFLU_RS10265	0.76	+1.9
2,264,467	-		PFLU_RS10265	0.77	-0.2
2,264,467	-		PFLU_RS10265	0.77	-0.7
2,264,467	-		PFLU_RS10265	0.77	-0.3
2,264,467	-		PFLU_RS10265	0.77	+1.3
2,264,467	-		PFLU_RS10265	0.77	+0.3
2,264,467	-		PFLU_RS10265	0.77	-1.1
2,264,474	-		PFLU_RS10265	0.78	-0.6
2,264,474	-		PFLU_RS10265	0.78	-1.6
2,264,474	-		PFLU_RS10265	0.78	+1.5
2,264,677	+				-0.5
2,264,677	+				+0.7
2,264,677	+				+0.1
2,264,677	+				-0.7
2,264,677	+				+0.3
2,264,677	+				+1.3
2,264,677	+				-2.9
2,264,677	+				-0.8
2,264,678	-				-0.2
2,264,678	-				-1.5
2,264,678	-				-2.0
2,264,678	-				+1.2
2,264,678	-				+2.4
2,264,678	-				+3.2
2,264,678	-				+1.1
2,264,678	-				-2.0
2,264,824	-				+0.9
2,264,824	-				-1.0
2,264,824	-				-0.8
2,264,824	-				-1.7
2,264,824	-				-0.4
2,264,824	-				+2.5
2,264,824	-				-1.1
2,264,824	-				-1.0
2,264,828	-				-1.8
2,264,828	-				-0.1
2,264,828	-				-0.7
2,264,835	-				+0.4
2,264,835	-				+0.7
2,264,839	-				+0.3
2,264,839	-				-0.2
2,264,839	-				-1.4
2,264,839	-				-0.2
2,264,839	-				+1.0
2,264,839	-				-0.2
2,264,839	-				-2.0
2,264,839	-				+2.3
2,265,161	+		PFLU_RS30630	0.84	-1.5
2,265,161	+		PFLU_RS30630	0.84	-2.4
2,265,350	-		PFLU_RS10270	0.21	+0.7
2,265,391	+		PFLU_RS10270	0.27	+0.3
2,265,391	+		PFLU_RS10270	0.27	-0.7
2,265,391	+		PFLU_RS10270	0.27	-1.7
2,265,391	+		PFLU_RS10270	0.27	-0.2
2,265,391	+		PFLU_RS10270	0.27	+1.2
2,265,392	-		PFLU_RS10270	0.27	-1.9
2,265,520	+		PFLU_RS10270	0.46	-1.0
2,265,520	+		PFLU_RS10270	0.46	+1.1
2,265,521	-		PFLU_RS10270	0.46	+1.0
2,265,521	-		PFLU_RS10270	0.46	-0.8
2,265,521	-		PFLU_RS10270	0.46	+1.1
2,265,521	-		PFLU_RS10270	0.46	-0.7
2,265,604	+		PFLU_RS10270	0.58	+1.7
2,265,605	-		PFLU_RS10270	0.58	-0.2