Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04174 and H281DRAFT_04175 are separated by 237 nucleotides H281DRAFT_04175 and H281DRAFT_04176 are separated by 30 nucleotides H281DRAFT_04176 and H281DRAFT_04177 are separated by 128 nucleotides
H281DRAFT_04174: H281DRAFT_04174 - Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain, at 291,013 to 292,020
_04174
H281DRAFT_04175: H281DRAFT_04175 - Carbon monoxide dehydrogenase subunit G, at 292,258 to 292,992
_04175
H281DRAFT_04176: H281DRAFT_04176 - Uncharacterized conserved protein, DUF427 family, at 293,023 to 293,415
_04176
H281DRAFT_04177: H281DRAFT_04177 - hypothetical protein, at 293,544 to 294,041
_04177
Position (kb) 292
293 Strain fitness (log2 ratio) -1
0
1 at 291.291 kb on + strand, within H281DRAFT_04174 at 291.292 kb on - strand, within H281DRAFT_04174 at 291.380 kb on + strand, within H281DRAFT_04174 at 291.508 kb on + strand, within H281DRAFT_04174 at 291.508 kb on + strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.509 kb on - strand, within H281DRAFT_04174 at 291.569 kb on + strand, within H281DRAFT_04174 at 291.569 kb on + strand, within H281DRAFT_04174 at 291.570 kb on - strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.664 kb on + strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 291.665 kb on - strand, within H281DRAFT_04174 at 292.060 kb on - strand at 292.172 kb on + strand at 292.199 kb on + strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.287 kb on - strand at 292.465 kb on + strand, within H281DRAFT_04175 at 292.466 kb on - strand, within H281DRAFT_04175 at 292.466 kb on - strand, within H281DRAFT_04175 at 292.466 kb on - strand, within H281DRAFT_04175 at 292.851 kb on + strand, within H281DRAFT_04175 at 293.060 kb on + strand at 293.060 kb on + strand at 293.061 kb on - strand at 293.160 kb on - strand, within H281DRAFT_04176 at 293.162 kb on + strand, within H281DRAFT_04176 at 293.163 kb on - strand, within H281DRAFT_04176 at 293.355 kb on + strand, within H281DRAFT_04176 at 293.355 kb on + strand, within H281DRAFT_04176 at 293.356 kb on - strand, within H281DRAFT_04176 at 293.448 kb on + strand at 293.626 kb on + strand, within H281DRAFT_04177 at 293.645 kb on - strand, within H281DRAFT_04177 at 293.674 kb on + strand, within H281DRAFT_04177 at 293.675 kb on - strand, within H281DRAFT_04177 at 293.675 kb on - strand, within H281DRAFT_04177 at 293.711 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.749 kb on + strand, within H281DRAFT_04177 at 293.750 kb on - strand, within H281DRAFT_04177 at 293.768 kb on + strand, within H281DRAFT_04177
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 291,291 + H281DRAFT_04174 0.28 +0.3 291,292 - H281DRAFT_04174 0.28 -0.1 291,380 + H281DRAFT_04174 0.36 -0.5 291,508 + H281DRAFT_04174 0.49 -0.4 291,508 + H281DRAFT_04174 0.49 +0.6 291,509 - H281DRAFT_04174 0.49 -1.6 291,509 - H281DRAFT_04174 0.49 -0.3 291,509 - H281DRAFT_04174 0.49 -0.4 291,509 - H281DRAFT_04174 0.49 -0.0 291,569 + H281DRAFT_04174 0.55 +0.4 291,569 + H281DRAFT_04174 0.55 +1.1 291,570 - H281DRAFT_04174 0.55 -0.8 291,664 + H281DRAFT_04174 0.65 -0.4 291,664 + H281DRAFT_04174 0.65 +0.5 291,664 + H281DRAFT_04174 0.65 -0.4 291,664 + H281DRAFT_04174 0.65 +0.4 291,664 + H281DRAFT_04174 0.65 +0.3 291,665 - H281DRAFT_04174 0.65 -0.5 291,665 - H281DRAFT_04174 0.65 +0.2 291,665 - H281DRAFT_04174 0.65 +0.1 291,665 - H281DRAFT_04174 0.65 +0.1 291,665 - H281DRAFT_04174 0.65 +0.1 291,665 - H281DRAFT_04174 0.65 +0.3 291,665 - H281DRAFT_04174 0.65 +0.4 292,060 - +0.2 292,172 + +0.8 292,199 + +0.5 292,287 - +0.0 292,287 - +0.2 292,287 - +1.2 292,287 - +0.7 292,287 - +0.9 292,465 + H281DRAFT_04175 0.28 -0.7 292,466 - H281DRAFT_04175 0.28 +0.1 292,466 - H281DRAFT_04175 0.28 -0.1 292,466 - H281DRAFT_04175 0.28 +0.4 292,851 + H281DRAFT_04175 0.81 -0.6 293,060 + -0.0 293,060 + -0.0 293,061 - +0.4 293,160 - H281DRAFT_04176 0.35 +0.8 293,162 + H281DRAFT_04176 0.35 -0.3 293,163 - H281DRAFT_04176 0.36 +0.9 293,355 + H281DRAFT_04176 0.84 -0.3 293,355 + H281DRAFT_04176 0.84 -0.1 293,356 - H281DRAFT_04176 0.85 +0.8 293,448 + -1.4 293,626 + H281DRAFT_04177 0.16 +1.1 293,645 - H281DRAFT_04177 0.20 +0.1 293,674 + H281DRAFT_04177 0.26 +0.1 293,675 - H281DRAFT_04177 0.26 +0.5 293,675 - H281DRAFT_04177 0.26 +0.3 293,711 + H281DRAFT_04177 0.34 -0.5 293,749 + H281DRAFT_04177 0.41 +0.1 293,749 + H281DRAFT_04177 0.41 +0.8 293,749 + H281DRAFT_04177 0.41 -0.0 293,750 - H281DRAFT_04177 0.41 +0.6 293,768 + H281DRAFT_04177 0.45 -0.0
Or see this region's nucleotide sequence