Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04069 and H281DRAFT_04070 are separated by 64 nucleotides H281DRAFT_04070 and H281DRAFT_04071 overlap by 1 nucleotides H281DRAFT_04071 and H281DRAFT_04072 are separated by 79 nucleotides
H281DRAFT_04069: H281DRAFT_04069 - L-aspartate oxidase, at 169,390 to 170,988
_04069
H281DRAFT_04070: H281DRAFT_04070 - nicotinate-nucleotide pyrophosphorylase [carboxylating], at 171,053 to 171,982
_04070
H281DRAFT_04071: H281DRAFT_04071 - quinolinate synthetase, at 171,982 to 173,169
_04071
H281DRAFT_04072: H281DRAFT_04072 - stearoyl-CoA desaturase (delta-9 desaturase), at 173,249 to 174,406
_04072
Position (kb) 171
172
173
174 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 171.035 kb on + strand at 171.036 kb on - strand at 171.072 kb on + strand at 171.408 kb on + strand, within H281DRAFT_04070 at 171.409 kb on - strand, within H281DRAFT_04070 at 171.454 kb on - strand, within H281DRAFT_04070 at 171.514 kb on + strand, within H281DRAFT_04070 at 171.534 kb on + strand, within H281DRAFT_04070 at 171.564 kb on - strand, within H281DRAFT_04070 at 171.602 kb on - strand, within H281DRAFT_04070 at 171.886 kb on - strand, within H281DRAFT_04070 at 171.936 kb on + strand at 172.004 kb on + strand at 172.005 kb on - strand at 172.005 kb on - strand at 172.054 kb on - strand at 172.077 kb on + strand at 172.077 kb on + strand at 172.077 kb on + strand at 172.077 kb on + strand at 172.077 kb on + strand at 172.078 kb on - strand at 172.078 kb on - strand at 172.135 kb on - strand, within H281DRAFT_04071 at 172.179 kb on + strand, within H281DRAFT_04071 at 172.234 kb on - strand, within H281DRAFT_04071 at 172.234 kb on - strand, within H281DRAFT_04071 at 172.279 kb on - strand, within H281DRAFT_04071 at 172.279 kb on - strand, within H281DRAFT_04071 at 172.533 kb on - strand at 172.533 kb on - strand, within H281DRAFT_04071 at 172.720 kb on + strand, within H281DRAFT_04071 at 172.721 kb on - strand, within H281DRAFT_04071 at 172.937 kb on + strand, within H281DRAFT_04071 at 172.937 kb on + strand, within H281DRAFT_04071 at 172.937 kb on + strand, within H281DRAFT_04071 at 172.937 kb on + strand, within H281DRAFT_04071 at 172.938 kb on - strand, within H281DRAFT_04071 at 172.938 kb on - strand, within H281DRAFT_04071 at 172.938 kb on - strand, within H281DRAFT_04071 at 172.938 kb on - strand, within H281DRAFT_04071 at 172.940 kb on + strand, within H281DRAFT_04071 at 172.940 kb on + strand, within H281DRAFT_04071 at 172.940 kb on + strand, within H281DRAFT_04071 at 172.940 kb on + strand, within H281DRAFT_04071 at 172.941 kb on - strand, within H281DRAFT_04071 at 172.941 kb on - strand, within H281DRAFT_04071 at 173.155 kb on + strand at 173.155 kb on + strand at 173.156 kb on - strand at 173.223 kb on + strand at 173.250 kb on + strand at 173.250 kb on + strand at 173.251 kb on - strand at 173.406 kb on + strand, within H281DRAFT_04072 at 173.521 kb on - strand, within H281DRAFT_04072
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 171,035 + -0.4 171,036 - +0.1 171,072 + -1.4 171,408 + H281DRAFT_04070 0.38 -0.5 171,409 - H281DRAFT_04070 0.38 -0.3 171,454 - H281DRAFT_04070 0.43 -1.5 171,514 + H281DRAFT_04070 0.50 -0.9 171,534 + H281DRAFT_04070 0.52 -1.9 171,564 - H281DRAFT_04070 0.55 -2.0 171,602 - H281DRAFT_04070 0.59 -2.1 171,886 - H281DRAFT_04070 0.90 -2.7 171,936 + -1.6 172,004 + -1.0 172,005 - -1.5 172,005 - -2.1 172,054 - -1.6 172,077 + -1.2 172,077 + -1.6 172,077 + -0.6 172,077 + -0.9 172,077 + -1.5 172,078 - -1.8 172,078 - -2.1 172,135 - H281DRAFT_04071 0.13 -0.6 172,179 + H281DRAFT_04071 0.17 -2.0 172,234 - H281DRAFT_04071 0.21 -3.0 172,234 - H281DRAFT_04071 0.21 -1.4 172,279 - H281DRAFT_04071 0.25 -1.8 172,279 - H281DRAFT_04071 0.25 -2.6 172,533 - -0.5 172,533 - H281DRAFT_04071 0.46 -2.8 172,720 + H281DRAFT_04071 0.62 -0.6 172,721 - H281DRAFT_04071 0.62 -1.6 172,937 + H281DRAFT_04071 0.80 -1.5 172,937 + H281DRAFT_04071 0.80 -2.1 172,937 + H281DRAFT_04071 0.80 +1.1 172,937 + H281DRAFT_04071 0.80 -2.1 172,938 - H281DRAFT_04071 0.80 -1.0 172,938 - H281DRAFT_04071 0.80 -2.4 172,938 - H281DRAFT_04071 0.80 -1.6 172,938 - H281DRAFT_04071 0.80 -1.2 172,940 + H281DRAFT_04071 0.81 -1.9 172,940 + H281DRAFT_04071 0.81 -1.5 172,940 + H281DRAFT_04071 0.81 -1.5 172,940 + H281DRAFT_04071 0.81 -1.9 172,941 - H281DRAFT_04071 0.81 -1.5 172,941 - H281DRAFT_04071 0.81 -1.2 173,155 + -1.7 173,155 + -2.5 173,156 - +0.2 173,223 + -3.7 173,250 + +0.5 173,250 + +1.3 173,251 - +0.4 173,406 + H281DRAFT_04072 0.14 -0.5 173,521 - H281DRAFT_04072 0.23 +0.9
Or see this region's nucleotide sequence