Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03041 and H281DRAFT_03042 are separated by 253 nucleotides H281DRAFT_03042 and H281DRAFT_03043 are separated by 102 nucleotides H281DRAFT_03043 and H281DRAFT_03044 are separated by 48 nucleotides
H281DRAFT_03041: H281DRAFT_03041 - Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family, at 71,810 to 72,664
_03041
H281DRAFT_03042: H281DRAFT_03042 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 72,918 to 73,682
_03042
H281DRAFT_03043: H281DRAFT_03043 - Oxidoreductase-like protein, N-terminal, at 73,785 to 74,021
_03043
H281DRAFT_03044: H281DRAFT_03044 - NAD-dependent protein deacetylase, SIR2 family, at 74,070 to 74,939
_03044
Position (kb) 72
73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 71.952 kb on - strand, within H281DRAFT_03041 at 72.045 kb on - strand, within H281DRAFT_03041 at 72.296 kb on + strand, within H281DRAFT_03041 at 72.310 kb on + strand, within H281DRAFT_03041 at 72.483 kb on - strand, within H281DRAFT_03041 at 72.664 kb on + strand at 72.665 kb on - strand at 72.836 kb on - strand at 73.011 kb on + strand, within H281DRAFT_03042 at 73.014 kb on - strand, within H281DRAFT_03042 at 73.344 kb on - strand, within H281DRAFT_03042 at 73.720 kb on + strand at 73.720 kb on + strand at 73.720 kb on + strand at 73.720 kb on + strand at 73.721 kb on - strand at 73.721 kb on - strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.722 kb on + strand at 73.723 kb on - strand at 73.723 kb on - strand at 73.723 kb on - strand at 73.883 kb on + strand, within H281DRAFT_03043
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 71,952 - H281DRAFT_03041 0.17 -0.0 72,045 - H281DRAFT_03041 0.27 +0.0 72,296 + H281DRAFT_03041 0.57 +0.8 72,310 + H281DRAFT_03041 0.58 -0.3 72,483 - H281DRAFT_03041 0.79 -0.2 72,664 + +0.3 72,665 - +0.0 72,836 - -0.1 73,011 + H281DRAFT_03042 0.12 -3.3 73,014 - H281DRAFT_03042 0.13 -0.7 73,344 - H281DRAFT_03042 0.56 -0.0 73,720 + +1.0 73,720 + -0.9 73,720 + -0.4 73,720 + -0.4 73,721 - +1.3 73,721 - -0.2 73,722 + +0.4 73,722 + +1.6 73,722 + -0.8 73,722 + -0.2 73,723 - -0.5 73,723 - -0.1 73,723 - -0.3 73,883 + H281DRAFT_03043 0.41 -0.1
Or see this region's nucleotide sequence