Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03006 and H281DRAFT_03007 are separated by 513 nucleotides H281DRAFT_03007 and H281DRAFT_03008 are separated by 24 nucleotides
H281DRAFT_03006: H281DRAFT_03006 - transcriptional regulator, GntR family, at 31,012 to 31,731
_03006
H281DRAFT_03007: H281DRAFT_03007 - acetolactate synthase-1/2/3 large subunit, at 32,245 to 34,008
_03007
H281DRAFT_03008: H281DRAFT_03008 - formyl-CoA transferase, at 34,033 to 35,280
_03008
Position (kb) 32
33
34
35 Strain fitness (log2 ratio) -2
-1
0
1 at 31.282 kb on + strand, within H281DRAFT_03006 at 31.536 kb on + strand, within H281DRAFT_03006 at 31.616 kb on + strand, within H281DRAFT_03006 at 31.616 kb on + strand, within H281DRAFT_03006 at 31.737 kb on + strand at 31.737 kb on + strand at 31.737 kb on + strand at 31.738 kb on - strand at 31.738 kb on - strand at 31.897 kb on + strand at 32.152 kb on + strand at 32.167 kb on - strand at 32.167 kb on - strand at 32.426 kb on - strand, within H281DRAFT_03007 at 32.794 kb on + strand, within H281DRAFT_03007 at 32.794 kb on + strand, within H281DRAFT_03007 at 32.795 kb on - strand, within H281DRAFT_03007 at 32.795 kb on - strand, within H281DRAFT_03007 at 32.816 kb on + strand, within H281DRAFT_03007 at 32.816 kb on + strand, within H281DRAFT_03007 at 32.960 kb on - strand, within H281DRAFT_03007 at 33.012 kb on - strand, within H281DRAFT_03007 at 33.125 kb on + strand, within H281DRAFT_03007 at 33.125 kb on + strand, within H281DRAFT_03007 at 33.183 kb on + strand, within H281DRAFT_03007 at 33.290 kb on + strand, within H281DRAFT_03007 at 33.290 kb on + strand, within H281DRAFT_03007 at 33.290 kb on + strand, within H281DRAFT_03007 at 33.343 kb on - strand, within H281DRAFT_03007 at 33.445 kb on + strand, within H281DRAFT_03007 at 33.481 kb on + strand, within H281DRAFT_03007 at 33.482 kb on - strand, within H281DRAFT_03007 at 33.482 kb on - strand, within H281DRAFT_03007 at 34.207 kb on + strand, within H281DRAFT_03008 at 34.252 kb on - strand, within H281DRAFT_03008 at 34.426 kb on + strand, within H281DRAFT_03008 at 34.427 kb on - strand, within H281DRAFT_03008 at 34.828 kb on + strand, within H281DRAFT_03008 at 34.950 kb on + strand, within H281DRAFT_03008
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 31,282 + H281DRAFT_03006 0.38 -0.6 31,536 + H281DRAFT_03006 0.73 -2.0 31,616 + H281DRAFT_03006 0.84 -2.0 31,616 + H281DRAFT_03006 0.84 -1.3 31,737 + -0.4 31,737 + -0.2 31,737 + +0.6 31,738 - +0.7 31,738 - +1.0 31,897 + -1.3 32,152 + -1.1 32,167 - -0.3 32,167 - +0.4 32,426 - H281DRAFT_03007 0.10 -0.6 32,794 + H281DRAFT_03007 0.31 +1.0 32,794 + H281DRAFT_03007 0.31 -0.2 32,795 - H281DRAFT_03007 0.31 +1.0 32,795 - H281DRAFT_03007 0.31 +0.9 32,816 + H281DRAFT_03007 0.32 +0.8 32,816 + H281DRAFT_03007 0.32 +0.0 32,960 - H281DRAFT_03007 0.41 -0.0 33,012 - H281DRAFT_03007 0.43 -0.0 33,125 + H281DRAFT_03007 0.50 +1.2 33,125 + H281DRAFT_03007 0.50 -0.1 33,183 + H281DRAFT_03007 0.53 -0.1 33,290 + H281DRAFT_03007 0.59 +0.8 33,290 + H281DRAFT_03007 0.59 -0.2 33,290 + H281DRAFT_03007 0.59 -0.3 33,343 - H281DRAFT_03007 0.62 -0.2 33,445 + H281DRAFT_03007 0.68 +0.0 33,481 + H281DRAFT_03007 0.70 +0.1 33,482 - H281DRAFT_03007 0.70 +0.7 33,482 - H281DRAFT_03007 0.70 -0.1 34,207 + H281DRAFT_03008 0.14 -1.4 34,252 - H281DRAFT_03008 0.18 +0.4 34,426 + H281DRAFT_03008 0.31 +0.6 34,427 - H281DRAFT_03008 0.32 +0.6 34,828 + H281DRAFT_03008 0.64 +0.0 34,950 + H281DRAFT_03008 0.73 -0.0
Or see this region's nucleotide sequence