Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01630 and H281DRAFT_01631 are separated by 20 nucleotides H281DRAFT_01631 and H281DRAFT_01632 are separated by 530 nucleotides
H281DRAFT_01630: H281DRAFT_01630 - gluconolactonase, at 509,657 to 510,601
_01630
H281DRAFT_01631: H281DRAFT_01631 - Dihydrodipicolinate synthase/N-acetylneuraminate lyase, at 510,622 to 511,563
_01631
H281DRAFT_01632: H281DRAFT_01632 - LuxR family transcriptional regulator, quorum-sensing transcription factor LasR, at 512,094 to 512,822
_01632
Position (kb) 510
511
512 Strain fitness (log2 ratio) -1
0
1
2 at 509.625 kb on + strand at 509.688 kb on + strand at 509.689 kb on - strand at 509.782 kb on + strand, within H281DRAFT_01630 at 509.782 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.809 kb on + strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 509.810 kb on - strand, within H281DRAFT_01630 at 510.012 kb on + strand, within H281DRAFT_01630 at 510.012 kb on + strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.013 kb on - strand, within H281DRAFT_01630 at 510.151 kb on - strand, within H281DRAFT_01630 at 510.151 kb on - strand, within H281DRAFT_01630 at 510.346 kb on + strand, within H281DRAFT_01630 at 510.836 kb on + strand, within H281DRAFT_01631 at 510.837 kb on - strand, within H281DRAFT_01631 at 511.067 kb on + strand, within H281DRAFT_01631 at 511.127 kb on + strand, within H281DRAFT_01631 at 511.128 kb on - strand, within H281DRAFT_01631 at 511.128 kb on - strand, within H281DRAFT_01631 at 511.128 kb on - strand, within H281DRAFT_01631 at 511.145 kb on + strand, within H281DRAFT_01631 at 511.146 kb on - strand, within H281DRAFT_01631 at 511.215 kb on + strand, within H281DRAFT_01631 at 511.444 kb on - strand, within H281DRAFT_01631 at 511.564 kb on - strand at 511.586 kb on + strand at 511.704 kb on - strand at 511.766 kb on - strand at 511.828 kb on - strand at 511.893 kb on + strand at 511.905 kb on + strand at 511.905 kb on + strand at 511.906 kb on - strand at 511.906 kb on - strand at 511.958 kb on - strand at 511.958 kb on - strand at 511.969 kb on - strand at 512.011 kb on - strand at 512.025 kb on - strand at 512.102 kb on - strand at 512.109 kb on - strand at 512.128 kb on + strand at 512.128 kb on + strand at 512.251 kb on - strand, within H281DRAFT_01632 at 512.251 kb on - strand, within H281DRAFT_01632 at 512.251 kb on - strand, within H281DRAFT_01632 at 512.251 kb on - strand, within H281DRAFT_01632 at 512.251 kb on - strand, within H281DRAFT_01632 at 512.251 kb on - strand, within H281DRAFT_01632 at 512.265 kb on + strand at 512.266 kb on - strand, within H281DRAFT_01632 at 512.266 kb on - strand, within H281DRAFT_01632 at 512.266 kb on - strand, within H281DRAFT_01632 at 512.266 kb on - strand, within H281DRAFT_01632 at 512.289 kb on + strand, within H281DRAFT_01632 at 512.290 kb on - strand, within H281DRAFT_01632 at 512.312 kb on + strand, within H281DRAFT_01632 at 512.314 kb on + strand, within H281DRAFT_01632 at 512.314 kb on + strand, within H281DRAFT_01632 at 512.314 kb on + strand, within H281DRAFT_01632 at 512.315 kb on - strand, within H281DRAFT_01632 at 512.315 kb on - strand, within H281DRAFT_01632 at 512.403 kb on + strand, within H281DRAFT_01632 at 512.403 kb on + strand, within H281DRAFT_01632 at 512.403 kb on + strand, within H281DRAFT_01632 at 512.403 kb on + strand, within H281DRAFT_01632 at 512.404 kb on - strand, within H281DRAFT_01632 at 512.540 kb on - strand, within H281DRAFT_01632 at 512.540 kb on - strand, within H281DRAFT_01632 at 512.557 kb on + strand, within H281DRAFT_01632 at 512.557 kb on + strand, within H281DRAFT_01632
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 509,625 + -0.3 509,688 + +0.1 509,689 - +0.3 509,782 + H281DRAFT_01630 0.13 +0.1 509,782 + H281DRAFT_01630 0.13 +0.4 509,809 + H281DRAFT_01630 0.16 +1.0 509,809 + H281DRAFT_01630 0.16 -0.1 509,809 + H281DRAFT_01630 0.16 +0.2 509,809 + H281DRAFT_01630 0.16 -0.4 509,810 - H281DRAFT_01630 0.16 -0.1 509,810 - H281DRAFT_01630 0.16 +0.0 509,810 - H281DRAFT_01630 0.16 +0.2 509,810 - H281DRAFT_01630 0.16 +0.1 510,012 + H281DRAFT_01630 0.38 -0.1 510,012 + H281DRAFT_01630 0.38 -0.1 510,013 - H281DRAFT_01630 0.38 +1.0 510,013 - H281DRAFT_01630 0.38 +1.0 510,013 - H281DRAFT_01630 0.38 +0.5 510,013 - H281DRAFT_01630 0.38 +0.0 510,151 - H281DRAFT_01630 0.52 +0.0 510,151 - H281DRAFT_01630 0.52 -0.1 510,346 + H281DRAFT_01630 0.73 +0.3 510,836 + H281DRAFT_01631 0.23 -0.4 510,837 - H281DRAFT_01631 0.23 -0.4 511,067 + H281DRAFT_01631 0.47 +0.2 511,127 + H281DRAFT_01631 0.54 +0.4 511,128 - H281DRAFT_01631 0.54 +0.5 511,128 - H281DRAFT_01631 0.54 -0.1 511,128 - H281DRAFT_01631 0.54 -0.0 511,145 + H281DRAFT_01631 0.56 -1.3 511,146 - H281DRAFT_01631 0.56 +0.4 511,215 + H281DRAFT_01631 0.63 -0.6 511,444 - H281DRAFT_01631 0.87 -0.4 511,564 - +0.3 511,586 + -0.8 511,704 - -0.2 511,766 - -0.1 511,828 - +0.8 511,893 + -0.2 511,905 + -1.3 511,905 + +1.0 511,906 - +0.3 511,906 - +0.2 511,958 - +0.1 511,958 - +0.2 511,969 - +0.3 512,011 - +0.8 512,025 - +0.8 512,102 - +1.7 512,109 - -0.8 512,128 + +0.4 512,128 + +0.3 512,251 - H281DRAFT_01632 0.22 +0.9 512,251 - H281DRAFT_01632 0.22 -0.1 512,251 - H281DRAFT_01632 0.22 +1.3 512,251 - H281DRAFT_01632 0.22 +1.0 512,251 - H281DRAFT_01632 0.22 +0.6 512,251 - H281DRAFT_01632 0.22 +0.1 512,265 + +2.5 512,266 - H281DRAFT_01632 0.24 +0.8 512,266 - H281DRAFT_01632 0.24 +0.6 512,266 - H281DRAFT_01632 0.24 +0.3 512,266 - H281DRAFT_01632 0.24 +0.8 512,289 + H281DRAFT_01632 0.27 +0.0 512,290 - H281DRAFT_01632 0.27 +1.5 512,312 + H281DRAFT_01632 0.30 +1.1 512,314 + H281DRAFT_01632 0.30 +0.5 512,314 + H281DRAFT_01632 0.30 +1.2 512,314 + H281DRAFT_01632 0.30 +1.0 512,315 - H281DRAFT_01632 0.30 +0.6 512,315 - H281DRAFT_01632 0.30 +1.1 512,403 + H281DRAFT_01632 0.42 +0.8 512,403 + H281DRAFT_01632 0.42 +1.0 512,403 + H281DRAFT_01632 0.42 +0.6 512,403 + H281DRAFT_01632 0.42 +0.8 512,404 - H281DRAFT_01632 0.43 +0.8 512,540 - H281DRAFT_01632 0.61 +1.0 512,540 - H281DRAFT_01632 0.61 +1.0 512,557 + H281DRAFT_01632 0.64 +1.2 512,557 + H281DRAFT_01632 0.64 +1.4
Or see this region's nucleotide sequence