Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4129

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
4,288,057	+		Ga0059261_4128	0.72	+0.4
4,288,057	+		Ga0059261_4128	0.72	-0.5
4,288,057	+		Ga0059261_4128	0.72	-0.6
4,288,057	+		Ga0059261_4128	0.72	+0.1
4,288,058	-		Ga0059261_4128	0.72	+1.8
4,288,058	-		Ga0059261_4128	0.72	+0.4
4,288,058	-		Ga0059261_4128	0.72	-0.6
4,288,058	-		Ga0059261_4128	0.72	-0.6
4,288,209	+		Ga0059261_4128	0.76	-0.6
4,288,209	+		Ga0059261_4128	0.76	+0.7
4,288,209	+		Ga0059261_4128	0.76	-0.4
4,288,209	+		Ga0059261_4128	0.76	+0.1
4,288,209	+		Ga0059261_4128	0.76	+0.8
4,288,210	-		Ga0059261_4128	0.77	-0.2
4,288,210	-		Ga0059261_4128	0.77	-0.1
4,288,210	-		Ga0059261_4128	0.77	-0.1
4,288,210	-		Ga0059261_4128	0.77	-0.2
4,288,210	-		Ga0059261_4128	0.77	-0.3
4,288,326	-		Ga0059261_4128	0.80	+0.6
4,288,429	+		Ga0059261_4128	0.83	-0.5
4,288,429	+		Ga0059261_4128	0.83	+0.1
4,288,429	+		Ga0059261_4128	0.83	-0.4
4,288,430	-		Ga0059261_4128	0.83	-0.1
4,288,430	-				-0.5
4,288,466	+		Ga0059261_4128	0.84	-0.3
4,288,466	+		Ga0059261_4128	0.84	-0.6
4,288,466	+		Ga0059261_4128	0.84	-0.1
4,288,466	+		Ga0059261_4128	0.84	+0.8
4,288,466	+		Ga0059261_4128	0.84	+0.6
4,288,466	+		Ga0059261_4128	0.84	+0.2
4,288,466	+		Ga0059261_4128	0.84	-0.6
4,288,466	+		Ga0059261_4128	0.84	+0.0
4,288,466	+		Ga0059261_4128	0.84	+0.3
4,288,466	+		Ga0059261_4128	0.84	+1.1
4,288,466	+		Ga0059261_4128	0.84	-1.0
4,288,466	+		Ga0059261_4128	0.84	-1.9
4,288,466	+		Ga0059261_4128	0.84	+0.5
4,288,466	+		Ga0059261_4128	0.84	+0.6
4,288,466	+		Ga0059261_4128	0.84	+0.9
4,288,466	+		Ga0059261_4128	0.84	+0.1
4,288,466	+		Ga0059261_4128	0.84	-1.5
4,288,466	+		Ga0059261_4128	0.84	+1.3
4,288,466	+		Ga0059261_4128	0.84	-0.3
4,288,467	-		Ga0059261_4128	0.84	-0.4
4,288,467	-		Ga0059261_4128	0.84	+0.8
4,288,467	-		Ga0059261_4128	0.84	-0.2
4,288,467	-		Ga0059261_4128	0.84	+0.8
4,288,467	-		Ga0059261_4128	0.84	+0.2
4,288,467	-		Ga0059261_4128	0.84	+0.7
4,288,467	-		Ga0059261_4128	0.84	+0.6
4,288,467	-				+1.1
4,288,467	-		Ga0059261_4128	0.84	+0.6
4,288,467	-		Ga0059261_4128	0.84	-0.6
4,288,468	+		Ga0059261_4128	0.84	-0.7
4,288,468	+		Ga0059261_4128	0.84	+0.1
4,288,468	+		Ga0059261_4128	0.84	-0.6
4,288,469	-		Ga0059261_4128	0.84	-0.4
4,288,470	+		Ga0059261_4128	0.84	-0.5
4,288,471	+				-2.1
4,288,471	+		Ga0059261_4128	0.84	+0.7
4,288,471	+		Ga0059261_4128	0.84	-0.2
4,288,471	+		Ga0059261_4128	0.84	+0.6
4,288,471	+		Ga0059261_4128	0.84	-0.5
4,288,472	-		Ga0059261_4128	0.84	+0.6
4,288,472	-		Ga0059261_4128	0.84	-0.3
4,288,472	-		Ga0059261_4128	0.84	-0.4
4,288,472	-		Ga0059261_4128	0.84	-0.3
4,288,472	-		Ga0059261_4128	0.84	+0.9
4,288,627	+		Ga0059261_4128	0.88	-0.6
4,288,627	+		Ga0059261_4128	0.88	-0.2
4,288,627	+		Ga0059261_4128	0.88	-0.7
4,288,628	-		Ga0059261_4128	0.88	+0.3
4,288,628	-		Ga0059261_4128	0.88	-0.5
4,288,844	-				-0.2
4,288,844	-				-0.2
4,288,844	-				-0.9
4,289,041	+				+0.3
4,289,041	+				-0.0
4,289,041	+				+0.4
4,289,042	-				+0.8
4,289,042	-				-1.3
4,289,042	-				+1.8
4,289,305	+				+0.8
4,289,305	+				+0.6
4,289,305	+				+0.1
4,289,305	+				-0.1
4,289,305	+				+0.5
4,289,305	+				+0.3
4,289,305	+				+0.4
4,289,306	-				-0.6
4,289,306	-				-0.7
4,289,306	-				-0.7
4,289,306	-				-1.3
4,289,306	-				+0.2
4,289,307	+				+0.2
4,289,307	+				-0.5
4,289,307	+				-0.0
4,289,307	+				+0.7
4,289,307	+				+1.0
4,289,307	+				+0.7
4,289,307	+				+0.9
4,289,307	+				+0.0
4,289,307	+				+0.5
4,289,307	+				+0.3
4,289,308	-				-0.3
4,289,308	-				+0.1
4,289,308	-				-0.7
4,289,308	-				+0.5
4,289,308	-				+1.1
4,289,308	-				+1.1
4,289,308	-				-0.9
4,289,308	-				-0.6
4,289,308	-				-0.5
4,289,308	-				+0.1
4,289,308	-				+1.1
4,289,308	-				+0.1
4,289,445	+		Ga0059261_4129	0.14	-0.3
4,289,446	-		Ga0059261_4129	0.14	-0.3
4,289,504	-		Ga0059261_4129	0.16	-0.0
4,289,504	-		Ga0059261_4129	0.16	+1.8
4,289,539	+		Ga0059261_4129	0.18	+0.4
4,289,539	+		Ga0059261_4129	0.18	-0.3
4,289,539	+		Ga0059261_4129	0.18	-0.4
4,289,539	+		Ga0059261_4129	0.18	+0.2
4,289,539	+		Ga0059261_4129	0.18	+0.5
4,289,539	+		Ga0059261_4129	0.18	-0.9
4,289,539	+		Ga0059261_4129	0.18	+0.0
4,289,540	-				-0.5
4,289,540	-		Ga0059261_4129	0.18	-0.2
4,289,540	-		Ga0059261_4129	0.18	-1.8
4,289,540	-		Ga0059261_4129	0.18	-0.3
4,289,540	-		Ga0059261_4129	0.18	+0.1
4,289,540	-				-1.5
4,289,540	-		Ga0059261_4129	0.18	-1.1
4,289,540	-		Ga0059261_4129	0.18	+0.6
4,289,540	-		Ga0059261_4129	0.18	+0.6
4,289,559	+		Ga0059261_4129	0.18	+0.4
4,289,560	-		Ga0059261_4129	0.18	+0.2
4,289,883	+		Ga0059261_4129	0.29	-0.3
4,289,883	+		Ga0059261_4129	0.29	-0.4
4,289,884	-		Ga0059261_4129	0.29	+0.5
4,289,884	-		Ga0059261_4129	0.29	+0.7
4,289,926	+		Ga0059261_4129	0.31	+0.2
4,289,927	-		Ga0059261_4129	0.31	-0.2
4,289,981	+		Ga0059261_4129	0.33	+1.3
4,289,982	-		Ga0059261_4129	0.33	-0.1
4,290,054	+		Ga0059261_4129	0.35	+0.2
4,290,054	+		Ga0059261_4129	0.35	-0.1
4,290,054	+		Ga0059261_4129	0.35	-0.8
4,290,054	+		Ga0059261_4129	0.35	+0.1
4,290,054	+		Ga0059261_4129	0.35	-0.1
4,290,055	-		Ga0059261_4129	0.35	-0.1
4,290,055	-		Ga0059261_4129	0.35	+0.1
4,290,055	-		Ga0059261_4129	0.35	+1.1
4,290,171	+		Ga0059261_4129	0.39	-0.9
4,290,171	+		Ga0059261_4129	0.39	-0.9
4,290,172	-		Ga0059261_4129	0.39	+0.2
4,290,172	-		Ga0059261_4129	0.39	-0.3
4,290,172	-		Ga0059261_4129	0.39	-0.5
4,290,228	+		Ga0059261_4129	0.41	+0.2
4,290,257	+		Ga0059261_4129	0.42	-0.6
4,290,257	+		Ga0059261_4129	0.42	-0.6
4,290,257	+		Ga0059261_4129	0.42	+0.8
4,290,258	-		Ga0059261_4129	0.42	-0.1
4,290,337	+		Ga0059261_4129	0.45	-1.1
4,290,337	+		Ga0059261_4129	0.45	-0.7
4,290,337	+		Ga0059261_4129	0.45	+0.4
4,290,337	+		Ga0059261_4129	0.45	-1.1
4,290,337	+		Ga0059261_4129	0.45	-0.2
4,290,337	+		Ga0059261_4129	0.45	+0.3
4,290,337	+		Ga0059261_4129	0.45	+0.6
4,290,337	+		Ga0059261_4129	0.45	+0.4
4,290,338	-		Ga0059261_4129	0.45	-1.2
4,290,338	-		Ga0059261_4129	0.45	-0.2
4,290,338	-		Ga0059261_4129	0.45	-0.6
4,290,338	-		Ga0059261_4129	0.45	+1.7
4,290,338	-		Ga0059261_4129	0.45	+0.0
4,290,338	-		Ga0059261_4129	0.45	+0.3
4,290,338	-		Ga0059261_4129	0.45	-0.0
4,290,338	-		Ga0059261_4129	0.45	-0.1
4,290,539	+		Ga0059261_4129	0.52	-1.1
4,290,539	+		Ga0059261_4129	0.52	+0.3
4,290,539	+		Ga0059261_4129	0.52	+1.4
4,290,539	+		Ga0059261_4129	0.52	+0.6
4,290,539	+		Ga0059261_4129	0.52	+0.3
4,290,539	+		Ga0059261_4129	0.52	-1.2
4,290,539	+		Ga0059261_4129	0.52	+0.4
4,290,539	+		Ga0059261_4129	0.52	+0.0
4,290,539	+		Ga0059261_4129	0.52	-0.1
4,290,539	+		Ga0059261_4129	0.52	+0.2
4,290,539	+		Ga0059261_4129	0.52	+0.1
4,290,540	-		Ga0059261_4129	0.52	-1.0
4,290,540	-		Ga0059261_4129	0.52	-1.1
4,290,540	-		Ga0059261_4129	0.52	-1.3
4,290,540	-		Ga0059261_4129	0.52	-1.9
4,290,540	-		Ga0059261_4129	0.52	-0.2
4,290,540	-		Ga0059261_4129	0.52	+0.6
4,290,540	-		Ga0059261_4129	0.52	-0.1
4,290,540	-		Ga0059261_4129	0.52	-0.4
4,290,540	-		Ga0059261_4129	0.52	-1.4
4,290,540	-		Ga0059261_4129	0.52	-0.0
4,290,540	-		Ga0059261_4129	0.52	+0.6
4,290,540	-		Ga0059261_4129	0.52	+0.2
4,290,630	-		Ga0059261_4129	0.55	+2.1
4,290,692	+		Ga0059261_4129	0.57	-0.8
4,290,748	+		Ga0059261_4129	0.59	+0.1
4,290,748	+		Ga0059261_4129	0.59	-0.1
4,290,748	+		Ga0059261_4129	0.59	+0.9
4,290,748	+		Ga0059261_4129	0.59	+0.2
4,290,748	+		Ga0059261_4129	0.59	-0.1
4,290,748	+		Ga0059261_4129	0.59	-0.3
4,290,748	+		Ga0059261_4129	0.59	-0.8
4,290,748	+		Ga0059261_4129	0.59	-0.4
4,290,749	-		Ga0059261_4129	0.59	-0.2
4,290,749	-		Ga0059261_4129	0.59	-0.6
4,290,749	-		Ga0059261_4129	0.59	-1.2
4,290,749	-		Ga0059261_4129	0.59	+0.1
4,290,749	-		Ga0059261_4129	0.59	+0.9
4,290,749	-		Ga0059261_4129	0.59	-1.5
4,290,758	+		Ga0059261_4129	0.59	+0.7
4,290,759	-		Ga0059261_4129	0.59	-0.7
4,290,873	+		Ga0059261_4129	0.63	+0.6
4,290,873	+		Ga0059261_4129	0.63	-0.9
4,290,873	+		Ga0059261_4129	0.63	-1.0
4,290,873	+		Ga0059261_4129	0.63	+0.1
4,290,873	+		Ga0059261_4129	0.63	-1.1
4,290,873	+		Ga0059261_4129	0.63	-0.5
4,290,874	-		Ga0059261_4129	0.63	-1.5
4,290,874	-		Ga0059261_4129	0.63	+0.4
4,290,874	-		Ga0059261_4129	0.63	+0.0
4,290,874	-		Ga0059261_4129	0.63	+0.0
4,290,874	-		Ga0059261_4129	0.63	+1.2
4,290,874	-		Ga0059261_4129	0.63	-0.7
4,291,063	+		Ga0059261_4129	0.69	-0.4
4,291,401	+		Ga0059261_4129	0.81	-1.2
4,291,401	+		Ga0059261_4129	0.81	+0.7
4,291,401	+		Ga0059261_4129	0.81	-0.4
4,291,402	-		Ga0059261_4129	0.81	-1.5
4,291,402	-		Ga0059261_4129	0.81	+0.2
4,291,402	-		Ga0059261_4129	0.81	-0.5
4,291,402	-		Ga0059261_4129	0.81	-0.6
4,291,402	-		Ga0059261_4129	0.81	+1.1
4,291,541	-		Ga0059261_4129	0.86	-0.3
4,291,541	-		Ga0059261_4129	0.86	-1.2
4,291,541	-		Ga0059261_4129	0.86	+0.4
4,291,541	-		Ga0059261_4129	0.86	-0.6
4,291,771	-				+0.5
4,291,771	-				+0.2
4,291,771	-				+0.2
4,291,870	+				+0.2
4,291,870	+				+2.7
4,291,870	+				+0.0
4,291,871	-				+0.3
4,291,871	-				+0.5
4,291,871	-				+0.2
4,291,871	-				-0.4
4,291,871	-				+0.4
4,291,871	-				-0.5
4,291,871	-				-0.1
4,291,913	+				-0.4
4,291,913	+				-0.5
4,291,913	+				-0.9
4,291,914	-				+2.1
4,291,935	-				+0.9
4,291,977	+				+0.2
4,291,977	+				-0.6
4,291,977	+				+0.0
4,291,977	+				+0.0
4,291,978	-				+0.8
4,292,000	-				-1.7
4,292,000	-				-0.0
4,292,082	+				-0.5
4,292,082	+				+0.2
4,292,082	+				+0.1
4,292,082	+				+0.2
4,292,083	-				+0.4
4,292,083	-				-0.2
4,292,083	-				+0.1
4,292,085	+				+0.7
4,292,085	+				-0.6
4,292,186	+				+0.6
4,292,186	+				+0.9
4,292,186	+				-0.3
4,292,186	+				-0.7
4,292,187	-				-0.6
4,292,187	-				-0.3
4,292,187	-				+0.2
4,292,189	+		Ga0059261_4130	0.10	-0.5
4,292,189	+		Ga0059261_4130	0.10	+1.3
4,292,189	+		Ga0059261_4130	0.10	+0.1
4,292,189	+		Ga0059261_4130	0.10	-1.2
4,292,189	+		Ga0059261_4130	0.10	-0.7
4,292,190	-		Ga0059261_4130	0.10	-0.4
4,292,190	-		Ga0059261_4130	0.10	-0.1
4,292,370	+		Ga0059261_4130	0.30	+0.2
4,292,370	+		Ga0059261_4130	0.30	+0.3
4,292,370	+		Ga0059261_4130	0.30	+0.4
4,292,371	-				+2.1
4,292,371	-				+1.7
4,292,549	+		Ga0059261_4130	0.50	+1.0
4,292,549	+		Ga0059261_4130	0.50	+1.1
4,292,550	-		Ga0059261_4130	0.50	-1.1
4,292,682	+		Ga0059261_4130	0.65	-1.1
4,292,682	+		Ga0059261_4130	0.65	+0.2
4,292,682	+		Ga0059261_4130	0.65	+0.0
4,292,682	+		Ga0059261_4130	0.65	+0.6
4,292,683	-		Ga0059261_4130	0.65	+0.9
4,292,783	+		Ga0059261_4130	0.76	+0.8
4,292,784	-		Ga0059261_4130	0.76	+0.1
4,292,784	-		Ga0059261_4130	0.76	+0.1