Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3963

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
4,077,140	+		Ga0059261_3961	0.88	+0.8
4,077,140	+		Ga0059261_3961	0.88	-0.1
4,077,140	+		Ga0059261_3961	0.88	-1.1
4,077,140	+		Ga0059261_3961	0.88	+0.1
4,077,140	+		Ga0059261_3961	0.88	+0.3
4,077,140	+				+0.1
4,077,140	+		Ga0059261_3961	0.88	+0.5
4,077,140	+		Ga0059261_3961	0.88	+0.2
4,077,140	+		Ga0059261_3961	0.88	+1.1
4,077,140	+		Ga0059261_3961	0.88	+1.1
4,077,141	-		Ga0059261_3961	0.88	-0.4
4,077,141	-		Ga0059261_3961	0.88	+0.3
4,077,141	-		Ga0059261_3961	0.88	-0.0
4,077,179	+				+0.4
4,077,180	-				-1.0
4,077,310	-				-0.2
4,077,310	-				-0.2
4,077,310	-				-1.0
4,077,310	-				+0.8
4,077,310	-				-0.3
4,077,460	+		Ga0059261_3962	0.15	-0.2
4,077,460	+		Ga0059261_3962	0.15	+0.0
4,077,460	+		Ga0059261_3962	0.15	+1.1
4,077,460	+		Ga0059261_3962	0.15	-0.3
4,077,461	-		Ga0059261_3962	0.15	-0.3
4,077,461	-		Ga0059261_3962	0.15	-1.6
4,077,461	-		Ga0059261_3962	0.15	+1.1
4,077,461	-		Ga0059261_3962	0.15	-0.5
4,077,461	-		Ga0059261_3962	0.15	-2.2
4,077,461	-		Ga0059261_3962	0.15	+1.1
4,077,461	-		Ga0059261_3962	0.15	-0.2
4,077,461	-		Ga0059261_3962	0.15	+0.9
4,077,461	-		Ga0059261_3962	0.15	-0.1
4,077,517	+		Ga0059261_3962	0.22	-0.4
4,077,517	+		Ga0059261_3962	0.22	+0.2
4,077,517	+		Ga0059261_3962	0.22	+1.7
4,077,517	+		Ga0059261_3962	0.22	-0.8
4,077,517	+		Ga0059261_3962	0.22	-0.3
4,077,518	-		Ga0059261_3962	0.23	-0.2
4,077,518	-		Ga0059261_3962	0.23	+0.8
4,077,518	-		Ga0059261_3962	0.23	-0.5
4,077,518	-		Ga0059261_3962	0.23	-0.0
4,077,568	+		Ga0059261_3962	0.29	+0.1
4,077,709	+		Ga0059261_3962	0.47	-0.7
4,077,709	+		Ga0059261_3962	0.47	-0.3
4,077,709	+		Ga0059261_3962	0.47	-0.8
4,077,710	-		Ga0059261_3962	0.47	-1.9
4,077,710	-		Ga0059261_3962	0.47	+0.3
4,077,772	+		Ga0059261_3962	0.54	-1.2
4,077,773	-		Ga0059261_3962	0.55	-0.3
4,077,838	+		Ga0059261_3962	0.63	+0.4
4,077,838	+		Ga0059261_3962	0.63	+0.1
4,077,839	-		Ga0059261_3962	0.63	-0.6
4,077,898	+		Ga0059261_3962	0.70	-0.1
4,077,899	-		Ga0059261_3962	0.70	+0.2
4,077,899	-		Ga0059261_3962	0.70	-0.3
4,077,899	-		Ga0059261_3962	0.70	+0.9
4,077,899	-		Ga0059261_3962	0.70	+1.1
4,077,994	+		Ga0059261_3962	0.82	+0.6
4,077,994	+		Ga0059261_3962	0.82	+0.9
4,077,995	-		Ga0059261_3962	0.83	-0.1
4,078,009	+		Ga0059261_3962	0.84	-2.1
4,078,009	+		Ga0059261_3962	0.84	-0.5
4,078,009	+		Ga0059261_3962	0.84	+0.1
4,078,010	-		Ga0059261_3962	0.84	+0.4
4,078,010	-		Ga0059261_3962	0.84	-1.1
4,078,152	+				+0.3
4,078,152	+				-1.7
4,078,152	+				+1.1
4,078,153	-				+0.4
4,078,326	+		Ga0059261_3963	0.13	+0.4
4,078,326	+		Ga0059261_3963	0.13	+0.5
4,078,327	-		Ga0059261_3963	0.13	+0.5
4,078,812	+		Ga0059261_3963	0.46	+0.1
4,078,813	-		Ga0059261_3963	0.46	+0.6
4,078,813	-		Ga0059261_3963	0.46	-0.6
4,078,813	-		Ga0059261_3963	0.46	-0.2
4,078,813	-		Ga0059261_3963	0.46	+0.3
4,079,043	+		Ga0059261_3963	0.61	+0.6
4,079,043	+		Ga0059261_3963	0.61	-0.3
4,079,043	+		Ga0059261_3963	0.61	+0.3
4,079,043	+		Ga0059261_3963	0.61	+0.2
4,079,043	+		Ga0059261_3963	0.61	+0.4
4,079,043	+		Ga0059261_3963	0.61	+0.6
4,079,044	-		Ga0059261_3963	0.61	-0.2
4,079,044	-		Ga0059261_3963	0.61	-0.1
4,079,044	-		Ga0059261_3963	0.61	+0.3
4,079,044	-		Ga0059261_3963	0.61	+0.1
4,079,302	+		Ga0059261_3963	0.78	+0.8
4,079,302	+		Ga0059261_3963	0.78	+1.2
4,079,303	-		Ga0059261_3963	0.79	-0.2
4,079,303	-		Ga0059261_3963	0.79	-1.2
4,079,303	-		Ga0059261_3963	0.79	-0.2
4,079,303	-		Ga0059261_3963	0.79	+0.4
4,079,303	-		Ga0059261_3963	0.79	+1.4
4,079,397	-		Ga0059261_3963	0.85	+0.2
4,079,397	-		Ga0059261_3963	0.85	+0.6
4,079,397	-		Ga0059261_3963	0.85	+0.1
4,079,397	-		Ga0059261_3963	0.85	-0.6
4,079,479	-				-0.1
4,079,577	+				+0.1
4,079,577	+				-0.3
4,079,577	+				-0.3
4,079,578	-				-0.1
4,079,578	-				+0.0
4,079,578	-				-0.8
4,079,607	+				-0.2
4,079,608	-				-0.0
4,079,608	-				-0.7
4,079,608	-				+0.4
4,079,633	+				-0.9
4,079,633	+				-0.3
4,079,634	-				-0.2
4,079,634	-				+0.1
4,079,669	+				+0.7
4,079,669	+				+0.9
4,079,731	+				-0.2
4,079,731	+				-0.4
4,079,731	+				+0.5
4,079,732	-				-0.1
4,079,732	-				+0.1
4,079,732	-				-0.6
4,079,733	-				-0.4
4,079,951	+		Ga0059261_3964	0.28	-0.4
4,079,951	+		Ga0059261_3964	0.28	+0.8
4,079,951	+		Ga0059261_3964	0.28	-0.4
4,079,952	-		Ga0059261_3964	0.28	-0.1
4,079,952	-		Ga0059261_3964	0.28	-0.2
4,079,952	-		Ga0059261_3964	0.28	+0.0
4,079,952	-		Ga0059261_3964	0.28	-1.1
4,079,952	-		Ga0059261_3964	0.28	-0.5
4,079,952	-		Ga0059261_3964	0.28	-0.1
4,080,251	+		Ga0059261_3964	0.53	+1.1
4,080,251	+		Ga0059261_3964	0.53	-0.9
4,080,251	+		Ga0059261_3964	0.53	+1.1
4,080,251	+		Ga0059261_3964	0.53	+0.7
4,080,251	+		Ga0059261_3964	0.53	+0.4
4,080,251	+		Ga0059261_3964	0.53	+0.4
4,080,252	-		Ga0059261_3964	0.53	+0.4
4,080,252	-		Ga0059261_3964	0.53	-0.3
4,080,252	-		Ga0059261_3964	0.53	-0.6
4,080,252	-		Ga0059261_3964	0.53	+1.0
4,080,252	-		Ga0059261_3964	0.53	+0.5
4,080,252	-		Ga0059261_3964	0.53	-0.4
4,080,252	-		Ga0059261_3964	0.53	-0.6
4,080,252	-		Ga0059261_3964	0.53	+0.3
4,080,270	+		Ga0059261_3964	0.55	+0.1
4,080,270	+				+0.1
4,080,270	+		Ga0059261_3964	0.55	-0.3
4,080,271	-		Ga0059261_3964	0.55	+1.1
4,080,271	-		Ga0059261_3964	0.55	-0.4
4,080,271	-		Ga0059261_3964	0.55	+0.8
4,080,271	-		Ga0059261_3964	0.55	-0.9
4,080,271	-		Ga0059261_3964	0.55	+0.2
4,080,271	-		Ga0059261_3964	0.55	+0.0
4,080,271	-		Ga0059261_3964	0.55	-0.3
4,080,271	-		Ga0059261_3964	0.55	+0.2
4,080,272	+		Ga0059261_3964	0.55	-0.2
4,080,272	+		Ga0059261_3964	0.55	-1.0
4,080,272	+		Ga0059261_3964	0.55	-0.2
4,080,272	+		Ga0059261_3964	0.55	+0.1
4,080,272	+		Ga0059261_3964	0.55	-0.9
4,080,273	-		Ga0059261_3964	0.55	+0.4
4,080,273	-		Ga0059261_3964	0.55	-0.2
4,080,273	-		Ga0059261_3964	0.55	+0.7
4,080,273	-		Ga0059261_3964	0.55	-0.7
4,080,273	-		Ga0059261_3964	0.55	-0.3
4,080,390	-		Ga0059261_3964	0.65	-0.7
4,080,390	-		Ga0059261_3964	0.65	+0.4
4,080,390	-		Ga0059261_3964	0.65	-0.1
4,080,539	+		Ga0059261_3964	0.77	-0.6
4,080,539	+		Ga0059261_3964	0.77	-0.1
4,080,539	+		Ga0059261_3964	0.77	+1.3
4,080,540	-		Ga0059261_3964	0.77	-0.4
4,080,540	-		Ga0059261_3964	0.77	+0.4
4,080,540	-		Ga0059261_3964	0.77	-0.5
4,080,540	-		Ga0059261_3964	0.77	-0.3
4,080,540	-		Ga0059261_3964	0.77	+0.1
4,080,540	-		Ga0059261_3964	0.77	+0.0
4,080,540	-		Ga0059261_3964	0.77	-0.5