Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3879

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,984,079	-		Ga0059261_3877	0.28	+0.0
3,984,079	-		Ga0059261_3877	0.28	+0.7
3,984,079	-				+0.1
3,984,079	-		Ga0059261_3877	0.28	+1.6
3,984,278	+				-0.3
3,984,278	+				-0.8
3,984,279	-				+0.1
3,984,352	+		Ga0059261_3878	0.16	-0.5
3,984,353	-		Ga0059261_3878	0.16	-0.0
3,984,497	+		Ga0059261_3878	0.37	+0.3
3,984,497	+		Ga0059261_3878	0.37	-0.5
3,984,497	+		Ga0059261_3878	0.37	-1.3
3,984,497	+		Ga0059261_3878	0.37	-0.1
3,984,497	+		Ga0059261_3878	0.37	-0.5
3,984,497	+		Ga0059261_3878	0.37	-0.5
3,984,497	+		Ga0059261_3878	0.37	-1.0
3,984,498	-		Ga0059261_3878	0.37	+0.3
3,984,498	-		Ga0059261_3878	0.37	-0.5
3,984,498	-		Ga0059261_3878	0.37	+0.6
3,984,498	-		Ga0059261_3878	0.37	+0.2
3,984,498	-				+0.3
3,984,498	-		Ga0059261_3878	0.37	+0.3
3,984,501	+		Ga0059261_3878	0.37	+0.3
3,984,501	+		Ga0059261_3878	0.37	+0.2
3,984,501	+		Ga0059261_3878	0.37	-0.5
3,984,502	-		Ga0059261_3878	0.37	-0.2
3,984,502	-		Ga0059261_3878	0.37	-2.5
3,984,502	-		Ga0059261_3878	0.37	-0.3
3,984,502	-		Ga0059261_3878	0.37	-0.4
3,984,502	-		Ga0059261_3878	0.37	+0.2
3,984,502	-		Ga0059261_3878	0.37	+0.0
3,984,560	-		Ga0059261_3878	0.46	+0.6
3,984,633	+		Ga0059261_3878	0.56	-0.3
3,984,633	+		Ga0059261_3878	0.56	+0.5
3,984,633	+		Ga0059261_3878	0.56	+0.2
3,984,633	+		Ga0059261_3878	0.56	-0.2
3,984,633	+		Ga0059261_3878	0.56	+1.1
3,984,633	+		Ga0059261_3878	0.56	-0.1
3,984,633	+		Ga0059261_3878	0.56	+0.3
3,984,633	+		Ga0059261_3878	0.56	+0.3
3,984,633	+		Ga0059261_3878	0.56	-0.1
3,984,633	+		Ga0059261_3878	0.56	+0.8
3,984,633	+		Ga0059261_3878	0.56	+0.5
3,984,633	+		Ga0059261_3878	0.56	+0.6
3,984,633	+		Ga0059261_3878	0.56	-0.9
3,984,633	+		Ga0059261_3878	0.56	+0.1
3,984,633	+		Ga0059261_3878	0.56	-0.3
3,984,634	-		Ga0059261_3878	0.57	-0.1
3,984,634	-		Ga0059261_3878	0.57	-0.2
3,984,634	-		Ga0059261_3878	0.57	-0.2
3,984,634	-		Ga0059261_3878	0.57	-0.5
3,984,634	-		Ga0059261_3878	0.57	-0.1
3,984,867	+				-0.3
3,984,867	+				+1.3
3,984,868	-				-0.3
3,984,868	-				-0.9
3,984,933	+				-0.3
3,984,933	+				-1.1
3,984,933	+				-1.5
3,984,933	+				+0.5
3,984,934	-				-0.3
3,984,934	-				-2.0
3,984,934	-				+0.9
3,984,934	-				-0.9
3,984,934	-				-0.8
3,984,934	-				+1.6
3,984,934	-				+1.1
3,985,175	-		Ga0059261_3879	0.18	-0.3
3,985,181	+		Ga0059261_3879	0.19	+0.4
3,985,181	+		Ga0059261_3879	0.19	+0.2
3,985,193	-		Ga0059261_3879	0.21	-1.1
3,985,193	-		Ga0059261_3879	0.21	-0.6
3,985,325	-		Ga0059261_3879	0.42	-0.3
3,985,464	-		Ga0059261_3879	0.65	-0.6
3,985,466	-		Ga0059261_3879	0.65	-1.1
3,985,468	+		Ga0059261_3879	0.66	+0.3
3,985,664	+				-0.6
3,985,664	+				-0.8
3,985,664	+				-0.8
3,985,664	+				-0.3
3,985,664	+				-0.1
3,985,682	+				-0.0
3,985,682	+				+0.6
3,985,682	+				-1.3
3,985,682	+				+0.7
3,985,682	+				+0.3
3,985,683	-				+0.5
3,985,683	-				+0.2
3,985,683	-				+0.7
3,985,683	-				+1.3
3,985,904	-				-0.5
3,985,985	-				-0.8
3,985,985	-				-0.1
3,985,985	-				+1.0
3,985,985	-				-0.2
3,985,985	-				+0.3
3,986,221	-		Ga0059261_3880	0.27	-0.2
3,986,221	-		Ga0059261_3880	0.27	+0.2
3,986,326	+		Ga0059261_3880	0.36	-1.0
3,986,326	+		Ga0059261_3880	0.36	-0.1
3,986,326	+		Ga0059261_3880	0.36	+0.3
3,986,326	+		Ga0059261_3880	0.36	+0.9
3,986,326	+		Ga0059261_3880	0.36	+0.1
3,986,327	-		Ga0059261_3880	0.36	-0.3
3,986,327	-		Ga0059261_3880	0.36	+1.1
3,986,327	-		Ga0059261_3880	0.36	+1.4
3,986,327	-		Ga0059261_3880	0.36	-0.6
3,986,335	+		Ga0059261_3880	0.37	-0.1
3,986,336	-		Ga0059261_3880	0.37	-0.4
3,986,336	-		Ga0059261_3880	0.37	-0.2
3,986,338	+		Ga0059261_3880	0.37	-0.0
3,986,339	-		Ga0059261_3880	0.37	-0.9
3,986,339	-		Ga0059261_3880	0.37	-0.2
3,986,374	+		Ga0059261_3880	0.40	-0.3
3,986,374	+		Ga0059261_3880	0.40	+0.7
3,986,374	+		Ga0059261_3880	0.40	-0.1
3,986,375	-		Ga0059261_3880	0.40	+0.1
3,986,375	-		Ga0059261_3880	0.40	+0.2
3,986,375	-		Ga0059261_3880	0.40	+0.0
3,986,375	-		Ga0059261_3880	0.40	-0.5
3,986,389	+		Ga0059261_3880	0.41	+0.3
3,986,389	+		Ga0059261_3880	0.41	+1.1
3,986,389	+		Ga0059261_3880	0.41	-0.3
3,986,389	+		Ga0059261_3880	0.41	-0.7
3,986,390	-		Ga0059261_3880	0.41	+0.1
3,986,390	-		Ga0059261_3880	0.41	+0.7
3,986,390	-		Ga0059261_3880	0.41	+0.9
3,986,549	-		Ga0059261_3880	0.55	-2.3