Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3627

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,745,519	-				-0.0
3,745,519	-				+1.4
3,745,519	-				+0.4
3,745,519	-				-0.7
3,745,521	-				+0.4
3,745,521	-				+0.6
3,745,552	+				+0.4
3,745,552	+				+0.2
3,745,552	+				-1.1
3,745,552	+				-0.6
3,745,552	+				-0.8
3,745,553	-				+0.3
3,745,553	-				+0.5
3,745,553	-				-0.6
3,745,553	-				+0.3
3,745,591	-				-0.2
3,745,655	+		Ga0059261_3627	0.17	+1.0
3,745,656	-		Ga0059261_3627	0.17	+0.5
3,745,656	-		Ga0059261_3627	0.17	-0.3
3,745,778	+		Ga0059261_3627	0.66	+0.0
3,745,778	+		Ga0059261_3627	0.66	+0.1
3,745,778	+		Ga0059261_3627	0.66	+0.0
3,745,778	+		Ga0059261_3627	0.66	-0.6
3,745,778	+		Ga0059261_3627	0.66	-0.4
3,745,778	+		Ga0059261_3627	0.66	-2.8
3,745,778	+		Ga0059261_3627	0.66	+1.2
3,745,778	+		Ga0059261_3627	0.66	+0.4
3,745,778	+		Ga0059261_3627	0.66	+0.3
3,745,778	+		Ga0059261_3627	0.66	+0.2
3,745,779	-		Ga0059261_3627	0.67	+0.8
3,745,779	-		Ga0059261_3627	0.67	+1.0
3,745,779	-		Ga0059261_3627	0.67	-0.9
3,745,779	-		Ga0059261_3627	0.67	+0.7
3,745,779	-		Ga0059261_3627	0.67	+0.1
3,745,867	+				-0.1
3,745,884	+				-0.3
3,745,885	-				-1.3
3,745,885	-				+0.0
3,745,885	-				-0.5
3,745,918	+				+0.4
3,745,918	+				+0.6
3,745,918	+				+0.8
3,745,918	+				-0.8
3,745,918	+				+0.2
3,745,918	+				-0.4
3,745,918	+				-0.6
3,745,918	+				-0.0
3,745,918	+				+0.5
3,745,919	-				+0.9
3,745,919	-				-0.8
3,745,919	-				-0.1
3,745,919	-				-0.7
3,745,919	-				-0.6
3,745,919	-				-0.9
3,745,919	-				-0.3
3,745,919	-				+0.0
3,745,973	+				-0.3
3,745,973	+				+0.9
3,745,973	+				-0.1
3,745,973	+				-0.7
3,745,973	+				+0.3
3,745,973	+				+0.7
3,745,974	-				+0.6
3,745,974	-				+0.7
3,745,974	-				-0.3
3,745,974	-				+0.8
3,745,974	-				+0.5
3,745,974	-				+0.2
3,745,974	-				-1.3
3,745,974	-				+0.1
3,745,974	-				+0.1
3,746,152	+				-0.7
3,746,152	+				-0.5
3,746,179	+				+0.4
3,746,179	+				-1.1
3,746,179	+				-0.6
3,746,180	-				+0.1
3,746,180	-				-0.2
3,746,180	-				+0.3
3,746,180	-				-0.0
3,746,180	-				+0.5
3,746,180	-				+0.3
3,746,180	-				+0.8
3,746,245	+		Ga0059261_3628	0.12	+1.0
3,746,245	+		Ga0059261_3628	0.12	+1.0
3,746,245	+		Ga0059261_3628	0.12	+0.4
3,746,245	+		Ga0059261_3628	0.12	+0.1
3,746,245	+		Ga0059261_3628	0.12	+0.4
3,746,246	-		Ga0059261_3628	0.12	+0.0
3,746,246	-		Ga0059261_3628	0.12	+2.6
3,746,246	-		Ga0059261_3628	0.12	-0.8
3,746,246	-		Ga0059261_3628	0.12	+0.2
3,746,299	+		Ga0059261_3628	0.14	-0.2
3,746,300	-		Ga0059261_3628	0.14	+0.2
3,746,300	-		Ga0059261_3628	0.14	-0.6
3,746,300	-		Ga0059261_3628	0.14	-0.3
3,746,425	+		Ga0059261_3628	0.20	+0.4
3,746,436	+		Ga0059261_3628	0.20	-1.4
3,746,436	+		Ga0059261_3628	0.20	+0.1
3,746,436	+				+0.0
3,746,436	+		Ga0059261_3628	0.20	+1.0
3,746,436	+		Ga0059261_3628	0.20	-0.4
3,746,436	+		Ga0059261_3628	0.20	+0.3
3,746,437	-		Ga0059261_3628	0.20	+0.6
3,746,437	-		Ga0059261_3628	0.20	+1.0
3,746,437	-		Ga0059261_3628	0.20	-0.8
3,746,437	-		Ga0059261_3628	0.20	-0.7
3,746,437	-		Ga0059261_3628	0.20	+0.1
3,746,554	+		Ga0059261_3628	0.26	-1.1
3,746,554	+		Ga0059261_3628	0.26	+0.4
3,746,554	+		Ga0059261_3628	0.26	+0.7
3,746,554	+		Ga0059261_3628	0.26	+1.2
3,746,554	+		Ga0059261_3628	0.26	+0.4
3,746,554	+		Ga0059261_3628	0.26	+0.1
3,746,554	+		Ga0059261_3628	0.26	-0.8
3,746,554	+		Ga0059261_3628	0.26	-0.6
3,746,554	+		Ga0059261_3628	0.26	-0.2
3,746,554	+		Ga0059261_3628	0.26	+0.6
3,746,554	+		Ga0059261_3628	0.26	+0.4
3,746,554	+		Ga0059261_3628	0.26	+0.0
3,746,555	-		Ga0059261_3628	0.26	+0.5
3,746,555	-		Ga0059261_3628	0.26	-0.7
3,746,555	-		Ga0059261_3628	0.26	-0.6
3,746,555	-		Ga0059261_3628	0.26	+0.0
3,746,555	-		Ga0059261_3628	0.26	-1.0
3,746,555	-		Ga0059261_3628	0.26	-0.6
3,746,668	+		Ga0059261_3628	0.31	-1.7
3,746,668	+		Ga0059261_3628	0.31	+0.2
3,746,668	+		Ga0059261_3628	0.31	+0.3
3,746,668	+		Ga0059261_3628	0.31	-1.1
3,746,668	+		Ga0059261_3628	0.31	-1.4
3,746,668	+		Ga0059261_3628	0.31	+0.2
3,746,669	-		Ga0059261_3628	0.31	+0.1
3,746,669	-		Ga0059261_3628	0.31	+0.3
3,746,669	-		Ga0059261_3628	0.31	-0.0
3,746,669	-		Ga0059261_3628	0.31	+0.6
3,746,669	-		Ga0059261_3628	0.31	+2.0