Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3371

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,498,382	+		Ga0059261_3369	0.44	-0.0
3,498,382	+		Ga0059261_3369	0.44	+0.4
3,498,461	+		Ga0059261_3369	0.51	+0.1
3,498,462	-		Ga0059261_3369	0.51	-0.9
3,498,462	-		Ga0059261_3369	0.51	+0.5
3,498,462	-		Ga0059261_3369	0.51	+1.1
3,498,462	-		Ga0059261_3369	0.51	-0.5
3,498,462	-		Ga0059261_3369	0.51	-0.3
3,498,572	+		Ga0059261_3369	0.60	+0.7
3,498,572	+		Ga0059261_3369	0.60	-0.3
3,498,572	+		Ga0059261_3369	0.60	-0.3
3,498,572	+		Ga0059261_3369	0.60	+0.7
3,498,572	+		Ga0059261_3369	0.60	-0.6
3,498,572	+		Ga0059261_3369	0.60	+0.1
3,498,572	+		Ga0059261_3369	0.60	-0.5
3,498,572	+		Ga0059261_3369	0.60	+0.9
3,498,572	+		Ga0059261_3369	0.60	-0.2
3,498,572	+		Ga0059261_3369	0.60	-0.9
3,498,573	-		Ga0059261_3369	0.60	-1.0
3,498,573	-		Ga0059261_3369	0.60	+0.5
3,498,573	-		Ga0059261_3369	0.60	-0.4
3,498,573	-		Ga0059261_3369	0.60	+0.8
3,498,573	-		Ga0059261_3369	0.60	+0.2
3,498,599	+		Ga0059261_3369	0.62	-0.9
3,498,600	-		Ga0059261_3369	0.63	-0.5
3,498,643	+		Ga0059261_3369	0.66	-0.6
3,498,643	+		Ga0059261_3369	0.66	+0.6
3,498,643	+		Ga0059261_3369	0.66	+0.2
3,498,643	+		Ga0059261_3369	0.66	+1.7
3,498,643	+		Ga0059261_3369	0.66	+0.3
3,498,644	-		Ga0059261_3369	0.66	+0.8
3,498,644	-		Ga0059261_3369	0.66	-0.5
3,498,644	-		Ga0059261_3369	0.66	+0.7
3,498,668	+		Ga0059261_3369	0.68	+0.4
3,498,668	+		Ga0059261_3369	0.68	-0.2
3,498,668	+		Ga0059261_3369	0.68	+0.0
3,498,668	+		Ga0059261_3369	0.68	+0.7
3,498,668	+		Ga0059261_3369	0.68	+0.2
3,498,668	+		Ga0059261_3369	0.68	+0.5
3,498,668	+		Ga0059261_3369	0.68	-0.8
3,498,669	-		Ga0059261_3369	0.68	-0.3
3,498,669	-		Ga0059261_3369	0.68	-0.3
3,498,669	-		Ga0059261_3369	0.68	-0.6
3,498,920	+		Ga0059261_3369	0.90	+0.6
3,498,920	+		Ga0059261_3369	0.90	-0.1
3,498,920	+		Ga0059261_3369	0.90	+2.1
3,498,921	-		Ga0059261_3369	0.90	+1.7
3,498,921	-		Ga0059261_3369	0.90	+0.5
3,498,921	-		Ga0059261_3369	0.90	+0.5
3,498,921	-		Ga0059261_3369	0.90	-0.2
3,498,921	-		Ga0059261_3369	0.90	-0.7
3,498,921	-		Ga0059261_3369	0.90	+0.5
3,498,922	+		Ga0059261_3369	0.90	-1.0
3,498,922	+				+0.1
3,498,922	+		Ga0059261_3369	0.90	+0.7
3,498,923	-		Ga0059261_3369	0.90	-0.0
3,498,923	-		Ga0059261_3369	0.90	-1.7
3,498,923	-		Ga0059261_3369	0.90	-0.1
3,498,923	-		Ga0059261_3369	0.90	-0.0
3,499,041	-				-0.7
3,499,321	+				-0.4
3,499,322	-				+0.4
3,499,338	+				+0.6
3,499,457	+		Ga0059261_3371	0.33	+0.3
3,499,695	+				-0.0
3,499,721	+				+0.8
3,499,773	-				-1.1
3,499,773	-				-0.3
3,499,878	+				+0.5
3,499,878	+				-0.5
3,499,879	-				+0.0
3,500,044	-		Ga0059261_3372	0.19	+0.2
3,500,044	-				+2.1
3,500,044	-		Ga0059261_3372	0.19	-1.3
3,500,201	+		Ga0059261_3372	0.27	+0.7
3,500,242	+		Ga0059261_3372	0.30	+0.5
3,500,242	+		Ga0059261_3372	0.30	+0.0
3,500,242	+		Ga0059261_3372	0.30	+2.1
3,500,243	-		Ga0059261_3372	0.30	+0.9
3,500,243	-		Ga0059261_3372	0.30	-0.4
3,500,243	-		Ga0059261_3372	0.30	-0.7
3,500,243	-		Ga0059261_3372	0.30	-0.2
3,500,243	-		Ga0059261_3372	0.30	+0.0
3,500,365	+		Ga0059261_3372	0.37	-0.2
3,500,365	+		Ga0059261_3372	0.37	-0.2
3,500,366	-		Ga0059261_3372	0.37	-0.0
3,500,366	-		Ga0059261_3372	0.37	+0.3
3,500,366	-		Ga0059261_3372	0.37	+1.7
3,500,366	-		Ga0059261_3372	0.37	-0.1
3,500,366	-		Ga0059261_3372	0.37	-0.2
3,500,366	-		Ga0059261_3372	0.37	+1.0
3,500,366	-				-0.2
3,500,458	+		Ga0059261_3372	0.42	-1.6