Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3249

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,382,081	-				-0.3
3,382,081	-				+0.4
3,382,081	-				-1.3
3,382,102	+				+0.2
3,382,102	+				+0.4
3,382,103	-				+0.5
3,382,103	-				-0.0
3,382,177	+		Ga0059261_3248	0.24	+0.1
3,382,177	+		Ga0059261_3248	0.24	+0.8
3,382,177	+		Ga0059261_3248	0.24	+0.6
3,382,177	+		Ga0059261_3248	0.24	-0.1
3,382,177	+		Ga0059261_3248	0.24	+0.4
3,382,178	-		Ga0059261_3248	0.25	-0.1
3,382,195	+		Ga0059261_3248	0.34	+0.2
3,382,195	+		Ga0059261_3248	0.34	+0.8
3,382,195	+		Ga0059261_3248	0.34	+0.4
3,382,195	+		Ga0059261_3248	0.34	+0.2
3,382,196	-		Ga0059261_3248	0.35	+0.2
3,382,196	-		Ga0059261_3248	0.35	+1.0
3,382,228	+		Ga0059261_3248	0.53	+0.6
3,382,228	+		Ga0059261_3248	0.53	-1.0
3,382,228	+		Ga0059261_3248	0.53	-0.7
3,382,228	+		Ga0059261_3248	0.53	-0.1
3,382,228	+		Ga0059261_3248	0.53	+0.1
3,382,229	-		Ga0059261_3248	0.54	-0.7
3,382,229	-		Ga0059261_3248	0.54	+1.2
3,382,230	+		Ga0059261_3248	0.55	-0.2
3,382,231	-		Ga0059261_3248	0.55	+0.4
3,382,231	-		Ga0059261_3248	0.55	+0.0
3,382,231	-		Ga0059261_3248	0.55	-0.3
3,382,231	-		Ga0059261_3248	0.55	-0.2
3,382,231	-		Ga0059261_3248	0.55	-0.4
3,382,362	+				-0.5
3,382,363	-				-0.4
3,382,363	-				+0.5
3,382,363	-				+0.0
3,382,363	-				+0.6
3,382,363	-				+0.2
3,382,474	+				-0.4
3,382,474	+				+0.2
3,382,514	+		Ga0059261_3249	0.14	+0.1
3,382,514	+		Ga0059261_3249	0.14	+0.4
3,382,515	-		Ga0059261_3249	0.15	+0.2
3,382,515	-		Ga0059261_3249	0.15	-0.7
3,382,515	-		Ga0059261_3249	0.15	-1.7
3,382,515	-		Ga0059261_3249	0.15	+0.4
3,382,516	+		Ga0059261_3249	0.15	-0.0
3,382,516	+		Ga0059261_3249	0.15	+0.3
3,382,516	+		Ga0059261_3249	0.15	-0.5
3,382,516	+		Ga0059261_3249	0.15	+0.0
3,382,517	-		Ga0059261_3249	0.15	+1.7
3,382,517	-		Ga0059261_3249	0.15	+0.3
3,382,517	-		Ga0059261_3249	0.15	+0.5
3,382,517	-		Ga0059261_3249	0.15	+0.1
3,382,556	+		Ga0059261_3249	0.21	+0.6
3,382,556	+		Ga0059261_3249	0.21	+0.6
3,382,556	+		Ga0059261_3249	0.21	-0.4
3,382,557	-		Ga0059261_3249	0.21	-0.3
3,382,557	-		Ga0059261_3249	0.21	+1.1
3,382,557	-		Ga0059261_3249	0.21	+0.2
3,382,557	-		Ga0059261_3249	0.21	-0.5
3,382,557	-		Ga0059261_3249	0.21	+0.6
3,382,557	-		Ga0059261_3249	0.21	+0.6
3,382,557	-		Ga0059261_3249	0.21	+1.2
3,382,557	-		Ga0059261_3249	0.21	+0.7
3,382,586	+		Ga0059261_3249	0.25	+2.1
3,382,586	+				+0.2
3,382,651	+		Ga0059261_3249	0.35	+0.5
3,382,651	+		Ga0059261_3249	0.35	+0.7
3,382,651	+		Ga0059261_3249	0.35	+0.0
3,382,651	+		Ga0059261_3249	0.35	-0.3
3,382,651	+		Ga0059261_3249	0.35	-0.2
3,382,651	+		Ga0059261_3249	0.35	-0.0
3,382,652	-		Ga0059261_3249	0.35	-0.9
3,382,652	-		Ga0059261_3249	0.35	+0.3
3,382,652	-		Ga0059261_3249	0.35	+0.1
3,382,699	-		Ga0059261_3249	0.42	-0.2
3,382,837	+		Ga0059261_3249	0.62	+0.5
3,382,837	+		Ga0059261_3249	0.62	+0.4
3,382,838	-		Ga0059261_3249	0.62	+0.2
3,382,838	-		Ga0059261_3249	0.62	-2.1
3,382,838	-		Ga0059261_3249	0.62	+0.6
3,383,185	+				+0.2
3,383,185	+				+0.0
3,383,185	+				+0.5
3,383,499	+		Ga0059261_3250	0.30	+0.1
3,383,499	+		Ga0059261_3250	0.30	+0.5
3,383,499	+		Ga0059261_3250	0.30	-0.1
3,383,499	+		Ga0059261_3250	0.30	+0.6
3,383,499	+		Ga0059261_3250	0.30	+2.1
3,383,499	+		Ga0059261_3250	0.30	+0.7
3,383,499	+		Ga0059261_3250	0.30	+0.2
3,383,499	+		Ga0059261_3250	0.30	+1.0
3,383,499	+		Ga0059261_3250	0.30	-0.0
3,383,499	+		Ga0059261_3250	0.30	-1.0
3,383,500	-		Ga0059261_3250	0.30	-0.6
3,383,500	-				+1.6
3,383,500	-				-0.4
3,383,685	-		Ga0059261_3250	0.52	-0.4
3,383,780	+		Ga0059261_3250	0.63	-0.7
3,383,781	-		Ga0059261_3250	0.63	-0.4
3,383,781	-		Ga0059261_3250	0.63	+0.9
3,383,781	-		Ga0059261_3250	0.63	+0.7
3,383,781	-		Ga0059261_3250	0.63	-0.0
3,383,885	+		Ga0059261_3250	0.75	+0.2
3,383,886	-		Ga0059261_3250	0.75	-0.5
3,383,961	+		Ga0059261_3250	0.84	+1.8
3,383,961	+		Ga0059261_3250	0.84	-0.2
3,383,962	-		Ga0059261_3250	0.84	-0.0
3,383,962	-		Ga0059261_3250	0.84	-0.2
3,383,963	+		Ga0059261_3250	0.84	+0.6
3,383,963	+		Ga0059261_3250	0.84	+0.3
3,383,964	-		Ga0059261_3250	0.84	-0.5
3,383,964	-		Ga0059261_3250	0.84	+0.2
3,383,964	-		Ga0059261_3250	0.84	-0.4
3,383,976	-		Ga0059261_3250	0.85	-0.6
3,383,976	-		Ga0059261_3250	0.85	+0.7
3,384,020	+				-1.5
3,384,020	+				-0.4
3,384,020	+				-0.3
3,384,021	-				-0.4
3,384,080	+				-0.1
3,384,080	+				+0.0
3,384,080	+				-1.0
3,384,080	+				-0.1
3,384,080	+				-0.5
3,384,080	+				-0.0
3,384,081	-				+0.3
3,384,081	-				+0.1
3,384,081	-				+0.2
3,384,081	-				-0.2
3,384,081	-				-0.4