Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3056

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,194,987	+		Ga0059261_3055	0.70	-0.2
3,194,987	+		Ga0059261_3055	0.70	-1.2
3,194,988	-		Ga0059261_3055	0.70	-1.0
3,195,110	+		Ga0059261_3055	0.83	-0.0
3,195,110	+		Ga0059261_3055	0.83	-0.1
3,195,110	+		Ga0059261_3055	0.83	+0.7
3,195,111	-		Ga0059261_3055	0.83	+0.7
3,195,111	-		Ga0059261_3055	0.83	-0.1
3,195,111	-		Ga0059261_3055	0.83	+0.9
3,195,111	-		Ga0059261_3055	0.83	+1.3
3,195,111	-		Ga0059261_3055	0.83	+1.2
3,195,111	-		Ga0059261_3055	0.83	-0.5
3,195,111	-		Ga0059261_3055	0.83	+0.1
3,195,111	-		Ga0059261_3055	0.83	-0.6
3,195,111	-		Ga0059261_3055	0.83	+1.9
3,195,111	-		Ga0059261_3055	0.83	-0.5
3,195,163	+		Ga0059261_3055	0.88	-1.5
3,195,163	+		Ga0059261_3055	0.88	+0.2
3,195,163	+		Ga0059261_3055	0.88	+0.3
3,195,163	+		Ga0059261_3055	0.88	-1.0
3,195,163	+		Ga0059261_3055	0.88	-1.1
3,195,163	+		Ga0059261_3055	0.88	-0.3
3,195,163	+		Ga0059261_3055	0.88	+0.3
3,195,163	+		Ga0059261_3055	0.88	+0.5
3,195,163	+		Ga0059261_3055	0.88	-0.3
3,195,164	-		Ga0059261_3055	0.89	+0.6
3,195,164	-		Ga0059261_3055	0.89	+0.3
3,195,164	-		Ga0059261_3055	0.89	-0.2
3,195,181	+				+0.3
3,195,181	+				-1.3
3,195,181	+				-0.5
3,195,181	+				-1.1
3,195,181	+				+0.4
3,195,181	+				-0.3
3,195,181	+				+0.3
3,195,181	+				+1.5
3,195,182	-				+1.3
3,195,182	-				-0.7
3,195,182	-				-0.5
3,195,182	-				-0.1
3,195,182	-				+0.1
3,195,182	-				+0.5
3,195,254	+				-1.0
3,195,255	-				+0.6
3,195,255	-				-0.3
3,195,361	+				-0.2
3,195,361	+				-0.9
3,195,711	+				+0.7
3,195,711	+				+1.5
3,195,711	+				+1.8
3,195,711	+				+0.5
3,195,711	+				+0.0
3,195,711	+				+0.7
3,195,712	-				-0.6
3,195,752	+				+0.0
3,195,752	+				-0.0
3,195,752	+				+0.5
3,195,753	-				-1.6
3,195,753	-				-0.6
3,195,753	-				-0.4
3,195,928	+				+0.3
3,195,928	+				-0.6
3,195,928	+				-0.4
3,195,928	+				+0.9
3,195,928	+				-0.0
3,195,928	+				+0.1
3,195,928	+				+0.0
3,195,928	+				+0.3
3,195,928	+				+1.3
3,195,928	+				-0.5
3,195,929	-				+0.3
3,195,929	-				+0.0
3,195,929	-				-0.7
3,195,929	-				+0.1
3,195,929	-				+0.3
3,195,929	-				+0.5
3,195,929	-				-0.1
3,195,929	-				+0.1
3,195,929	-				-0.6
3,195,929	-				+0.3
3,195,929	-				-0.6
3,195,929	-				+0.3
3,196,191	+		Ga0059261_3056	0.46	-1.7
3,196,191	+		Ga0059261_3056	0.46	+0.4
3,196,192	-		Ga0059261_3056	0.46	+0.6
3,196,196	-		Ga0059261_3056	0.47	+0.2
3,196,588	+				+0.4
3,196,588	+				+1.3
3,196,588	+				-0.0
3,196,588	+				-1.4
3,196,588	+				-0.7
3,196,589	-				+0.3
3,196,589	-				-0.2
3,196,712	+				+0.3
3,197,042	+		Ga0059261_3057	0.27	-1.0
3,197,042	+		Ga0059261_3057	0.27	+0.2
3,197,043	-		Ga0059261_3057	0.27	-0.4
3,197,043	-		Ga0059261_3057	0.27	+1.0
3,197,339	+		Ga0059261_3057	0.42	-0.4
3,197,340	-		Ga0059261_3057	0.42	-0.5
3,197,340	-		Ga0059261_3057	0.42	+0.3
3,197,340	-		Ga0059261_3057	0.42	+0.0
3,197,405	+		Ga0059261_3057	0.46	-0.2
3,197,405	+		Ga0059261_3057	0.46	-0.6
3,197,406	-		Ga0059261_3057	0.46	+0.5
3,197,441	+		Ga0059261_3057	0.48	+0.7
3,197,441	+		Ga0059261_3057	0.48	+0.3
3,197,441	+		Ga0059261_3057	0.48	+0.4
3,197,441	+		Ga0059261_3057	0.48	-0.0
3,197,441	+		Ga0059261_3057	0.48	-0.2
3,197,441	+		Ga0059261_3057	0.48	+0.3
3,197,442	-		Ga0059261_3057	0.48	+1.2
3,197,442	-		Ga0059261_3057	0.48	-0.4
3,197,442	-		Ga0059261_3057	0.48	+0.5
3,197,442	-		Ga0059261_3057	0.48	+0.1
3,197,443	+		Ga0059261_3057	0.48	-0.0
3,197,443	+		Ga0059261_3057	0.48	-0.4
3,197,444	-				-0.7
3,197,444	-		Ga0059261_3057	0.48	+0.0
3,197,444	-		Ga0059261_3057	0.48	+0.5