Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3031

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,163,171	+				-0.3
3,163,171	+				+0.0
3,163,171	+				+0.3
3,163,172	-				+1.8
3,163,172	-				+0.6
3,163,203	+				-0.5
3,163,203	+				-0.1
3,163,203	+				-0.3
3,163,203	+				-0.8
3,163,203	+				-0.2
3,163,203	+				+0.7
3,163,203	+				+0.9
3,163,203	+				-0.5
3,163,203	+				-0.2
3,163,203	+				+0.3
3,163,203	+				-0.1
3,163,203	+				+1.1
3,163,203	+				-0.3
3,163,204	-				+1.0
3,163,204	-				-1.7
3,163,204	-				+0.5
3,163,204	-				-1.5
3,163,204	-				-1.0
3,163,204	-				-0.8
3,163,317	-		Ga0059261_3029	0.20	-0.9
3,163,317	-		Ga0059261_3029	0.20	-0.3
3,163,317	-		Ga0059261_3029	0.20	-0.3
3,163,338	+		Ga0059261_3029	0.25	-0.0
3,163,339	-		Ga0059261_3029	0.25	-0.5
3,163,339	-		Ga0059261_3029	0.25	-0.8
3,163,525	+				+0.9
3,163,525	+		Ga0059261_3029	0.69	+0.4
3,163,526	-		Ga0059261_3029	0.69	-0.5
3,163,540	+		Ga0059261_3029	0.72	+0.1
3,163,540	+		Ga0059261_3029	0.72	-0.2
3,163,540	+		Ga0059261_3029	0.72	+0.5
3,163,540	+		Ga0059261_3029	0.72	-0.6
3,163,540	+		Ga0059261_3029	0.72	-0.9
3,163,540	+		Ga0059261_3029	0.72	-0.5
3,163,540	+		Ga0059261_3029	0.72	+1.3
3,163,540	+		Ga0059261_3029	0.72	+0.4
3,163,540	+		Ga0059261_3029	0.72	+0.7
3,163,540	+		Ga0059261_3029	0.72	-0.8
3,163,540	+		Ga0059261_3029	0.72	+1.2
3,163,540	+		Ga0059261_3029	0.72	-0.3
3,163,540	+		Ga0059261_3029	0.72	-0.1
3,163,540	+		Ga0059261_3029	0.72	+1.3
3,163,540	+		Ga0059261_3029	0.72	-0.2
3,163,541	-		Ga0059261_3029	0.72	-0.1
3,163,541	-		Ga0059261_3029	0.72	+0.3
3,163,541	-		Ga0059261_3029	0.72	-0.4
3,163,541	-		Ga0059261_3029	0.72	-0.3
3,163,541	-		Ga0059261_3029	0.72	-0.0
3,163,541	-		Ga0059261_3029	0.72	-0.0
3,163,541	-		Ga0059261_3029	0.72	-0.3
3,163,541	-		Ga0059261_3029	0.72	+0.2
3,163,541	-		Ga0059261_3029	0.72	+0.8
3,163,541	-		Ga0059261_3029	0.72	-0.2
3,163,541	-		Ga0059261_3029	0.72	-0.0
3,163,544	+		Ga0059261_3029	0.73	-0.5
3,163,544	+		Ga0059261_3029	0.73	-0.3
3,163,544	+		Ga0059261_3029	0.73	+0.4
3,163,544	+		Ga0059261_3029	0.73	+1.1
3,163,545	-		Ga0059261_3029	0.73	-0.4
3,163,545	-		Ga0059261_3029	0.73	-0.3
3,163,680	+				+0.4
3,163,680	+				+0.0
3,163,680	+				-0.4
3,163,680	+				-0.6
3,163,681	-				-1.5
3,163,681	-				+0.6
3,163,681	-				+0.5
3,163,681	-				-0.1
3,163,681	-				+1.0
3,163,681	-				+1.3
3,163,681	-				-0.9
3,163,681	-				+0.1
3,163,681	-				-0.2
3,164,032	+		Ga0059261_3030	0.63	-0.6
3,164,196	+		Ga0059261_3031	0.13	-1.3
3,164,196	+		Ga0059261_3031	0.13	-0.5
3,164,197	-		Ga0059261_3031	0.13	+0.7
3,164,197	-		Ga0059261_3031	0.13	-0.2
3,164,209	+		Ga0059261_3031	0.15	+0.7
3,164,209	+		Ga0059261_3031	0.15	+0.7
3,164,209	+		Ga0059261_3031	0.15	-0.3
3,164,210	-		Ga0059261_3031	0.16	-0.1
3,164,321	+		Ga0059261_3031	0.39	-0.2
3,164,321	+		Ga0059261_3031	0.39	+1.1
3,164,456	+		Ga0059261_3031	0.68	+0.5
3,164,456	+		Ga0059261_3031	0.68	-2.1
3,164,456	+		Ga0059261_3031	0.68	+0.4
3,164,457	-		Ga0059261_3031	0.68	-0.0
3,164,462	+		Ga0059261_3031	0.69	+0.2
3,164,462	+		Ga0059261_3031	0.69	+1.3
3,164,463	-		Ga0059261_3031	0.70	+0.9
3,164,577	+				-0.5
3,164,578	-				-0.1
3,164,578	-				-0.2
3,164,618	+				+0.1
3,164,618	+				+0.4
3,164,618	+				+0.2
3,164,618	+				-0.3
3,164,618	+				-1.5
3,164,618	+				+0.1
3,164,619	-				+0.1
3,164,619	-				-0.1
3,164,619	-				-0.8
3,164,856	+		Ga0059261_3032	0.22	+0.8
3,164,856	+		Ga0059261_3032	0.22	-1.5
3,164,857	-		Ga0059261_3032	0.22	-0.0
3,164,857	-		Ga0059261_3032	0.22	+0.1
3,164,939	+		Ga0059261_3032	0.29	-0.4
3,164,939	+		Ga0059261_3032	0.29	+0.6
3,164,940	-		Ga0059261_3032	0.29	-0.1
3,165,099	+		Ga0059261_3032	0.42	+0.3
3,165,099	+		Ga0059261_3032	0.42	-0.2
3,165,099	+		Ga0059261_3032	0.42	-0.2
3,165,241	+		Ga0059261_3032	0.54	-0.1
3,165,241	+		Ga0059261_3032	0.54	-0.4
3,165,242	-				-0.7
3,165,242	-		Ga0059261_3032	0.54	-0.6
3,165,242	-		Ga0059261_3032	0.54	+0.4
3,165,243	+		Ga0059261_3032	0.54	-1.7
3,165,243	+		Ga0059261_3032	0.54	+0.8
3,165,243	+		Ga0059261_3032	0.54	+0.7
3,165,243	+		Ga0059261_3032	0.54	+0.2
3,165,243	+		Ga0059261_3032	0.54	-0.6
3,165,243	+		Ga0059261_3032	0.54	-0.0
3,165,243	+		Ga0059261_3032	0.54	+0.5
3,165,243	+				-0.7
3,165,243	+		Ga0059261_3032	0.54	+1.6
3,165,243	+		Ga0059261_3032	0.54	+0.3
3,165,243	+		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	-0.9
3,165,244	-		Ga0059261_3032	0.54	-0.7
3,165,244	-		Ga0059261_3032	0.54	+1.1
3,165,244	-		Ga0059261_3032	0.54	-0.4
3,165,244	-		Ga0059261_3032	0.54	+0.4
3,165,244	-		Ga0059261_3032	0.54	+0.3
3,165,244	-		Ga0059261_3032	0.54	-0.2
3,165,244	-		Ga0059261_3032	0.54	+0.5
3,165,244	-		Ga0059261_3032	0.54	-0.3
3,165,244	-		Ga0059261_3032	0.54	-0.5
3,165,244	-		Ga0059261_3032	0.54	-0.2
3,165,244	-		Ga0059261_3032	0.54	-2.0
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,244	-		Ga0059261_3032	0.54	-0.5
3,165,244	-		Ga0059261_3032	0.54	-0.1
3,165,258	+		Ga0059261_3032	0.56	+0.2
3,165,258	+		Ga0059261_3032	0.56	+0.7
3,165,259	-		Ga0059261_3032	0.56	+0.0
3,165,259	-		Ga0059261_3032	0.56	-0.1
3,165,259	-		Ga0059261_3032	0.56	-0.3
3,165,259	-		Ga0059261_3032	0.56	-0.5
3,165,283	+		Ga0059261_3032	0.58	-0.6
3,165,283	+		Ga0059261_3032	0.58	-0.0
3,165,284	-		Ga0059261_3032	0.58	+0.1
3,165,284	-		Ga0059261_3032	0.58	-0.6
3,165,284	-		Ga0059261_3032	0.58	-0.2
3,165,284	-		Ga0059261_3032	0.58	+0.7
3,165,284	-				+0.6
3,165,284	-		Ga0059261_3032	0.58	+0.3
3,165,354	+		Ga0059261_3032	0.64	-0.6
3,165,354	+		Ga0059261_3032	0.64	+0.0
3,165,354	+		Ga0059261_3032	0.64	-0.6
3,165,355	-		Ga0059261_3032	0.64	-1.1
3,165,355	-		Ga0059261_3032	0.64	-0.1
3,165,355	-		Ga0059261_3032	0.64	+1.1
3,165,355	-		Ga0059261_3032	0.64	+1.7
3,165,355	-		Ga0059261_3032	0.64	+1.3
3,165,381	+		Ga0059261_3032	0.66	-0.2
3,165,381	+		Ga0059261_3032	0.66	-0.4
3,165,381	+		Ga0059261_3032	0.66	-0.3
3,165,381	+		Ga0059261_3032	0.66	+1.0
3,165,381	+		Ga0059261_3032	0.66	+0.1
3,165,381	+		Ga0059261_3032	0.66	-0.7
3,165,381	+		Ga0059261_3032	0.66	+0.5
3,165,381	+		Ga0059261_3032	0.66	+0.3
3,165,381	+		Ga0059261_3032	0.66	+1.1
3,165,381	+		Ga0059261_3032	0.66	-0.4
3,165,382	-		Ga0059261_3032	0.66	-0.2
3,165,382	-		Ga0059261_3032	0.66	+0.1
3,165,382	-		Ga0059261_3032	0.66	+2.3
3,165,382	-		Ga0059261_3032	0.66	+0.1
3,165,382	-				+0.7
3,165,382	-		Ga0059261_3032	0.66	+0.7
3,165,382	-		Ga0059261_3032	0.66	+0.4
3,165,382	-		Ga0059261_3032	0.66	-0.9
3,165,382	-		Ga0059261_3032	0.66	-0.7
3,165,382	-		Ga0059261_3032	0.66	+0.2
3,165,382	-		Ga0059261_3032	0.66	+1.1
3,165,464	+		Ga0059261_3032	0.73	-0.3
3,165,485	+		Ga0059261_3032	0.74	+0.1
3,165,485	+		Ga0059261_3032	0.74	+1.9
3,165,485	+		Ga0059261_3032	0.74	+0.4
3,165,485	+		Ga0059261_3032	0.74	-1.9
3,165,486	-		Ga0059261_3032	0.75	+0.9
3,165,486	-		Ga0059261_3032	0.75	-0.5
3,165,486	-		Ga0059261_3032	0.75	-0.4
3,165,486	-		Ga0059261_3032	0.75	-0.4