Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2993

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,113,905	+		Ga0059261_2991	0.68	+0.4
3,113,938	-		Ga0059261_2991	0.70	+0.2
3,113,998	+		Ga0059261_2991	0.73	-1.2
3,113,998	+		Ga0059261_2991	0.73	-0.6
3,113,998	+		Ga0059261_2991	0.73	-0.8
3,113,998	+		Ga0059261_2991	0.73	-0.4
3,113,999	-		Ga0059261_2991	0.73	+0.4
3,113,999	-		Ga0059261_2991	0.73	-1.1
3,113,999	-		Ga0059261_2991	0.73	-0.4
3,113,999	-		Ga0059261_2991	0.73	-0.3
3,114,343	+				+0.3
3,114,343	+				+1.1
3,114,344	-				+0.3
3,114,344	-				-0.4
3,114,511	+				+0.9
3,114,512	-				-0.7
3,114,512	-				-0.2
3,114,512	-				-0.1
3,114,512	-				+0.5
3,114,512	-				+0.6
3,114,802	+		Ga0059261_2992	0.77	-1.3
3,114,802	+		Ga0059261_2992	0.77	-0.3
3,114,802	+		Ga0059261_2992	0.77	-0.3
3,114,802	+		Ga0059261_2992	0.77	-0.6
3,114,802	+		Ga0059261_2992	0.77	-0.6
3,114,803	-		Ga0059261_2992	0.77	+0.5
3,114,803	-		Ga0059261_2992	0.77	-0.1
3,114,803	-		Ga0059261_2992	0.77	-0.4
3,114,803	-		Ga0059261_2992	0.77	-0.7
3,115,130	-		Ga0059261_2993	0.33	+0.7
3,115,130	-		Ga0059261_2993	0.33	+0.9
3,115,272	+		Ga0059261_2993	0.53	+0.1
3,115,272	+		Ga0059261_2993	0.53	-0.7
3,115,272	+		Ga0059261_2993	0.53	-0.1
3,115,272	+		Ga0059261_2993	0.53	+0.5
3,115,273	-		Ga0059261_2993	0.53	-0.0
3,115,273	-		Ga0059261_2993	0.53	+0.3
3,115,273	-		Ga0059261_2993	0.53	+0.8
3,115,356	+		Ga0059261_2993	0.65	+0.3
3,115,357	-		Ga0059261_2993	0.65	-0.1
3,115,357	-				+2.3
3,115,357	-		Ga0059261_2993	0.65	+0.0
3,115,917	+		Ga0059261_2994	0.15	+0.5
3,115,917	+		Ga0059261_2994	0.15	-0.9
3,115,917	+		Ga0059261_2994	0.15	+0.6
3,115,917	+		Ga0059261_2994	0.15	+0.9
3,115,917	+		Ga0059261_2994	0.15	-0.1
3,115,917	+		Ga0059261_2994	0.15	-0.6
3,115,917	+		Ga0059261_2994	0.15	+0.4
3,115,917	+		Ga0059261_2994	0.15	+0.3
3,115,917	+		Ga0059261_2994	0.15	-0.1
3,115,917	+		Ga0059261_2994	0.15	+0.3
3,115,917	+		Ga0059261_2994	0.15	+0.1
3,115,918	-		Ga0059261_2994	0.15	-0.2
3,115,918	-		Ga0059261_2994	0.15	-0.9
3,115,918	-		Ga0059261_2994	0.15	-0.7
3,115,918	-		Ga0059261_2994	0.15	-0.5
3,115,931	-		Ga0059261_2994	0.16	-0.5
3,116,181	+		Ga0059261_2994	0.31	+0.0
3,116,181	+		Ga0059261_2994	0.31	+0.2
3,116,242	+		Ga0059261_2994	0.34	+1.3
3,116,243	-		Ga0059261_2994	0.34	-0.3
3,116,243	-		Ga0059261_2994	0.34	-0.1
3,116,282	+		Ga0059261_2994	0.36	+0.0
3,116,282	+		Ga0059261_2994	0.36	-1.6
3,116,283	-		Ga0059261_2994	0.36	-0.5
3,116,283	-		Ga0059261_2994	0.36	+0.0
3,116,288	+		Ga0059261_2994	0.37	-1.4
3,116,349	+		Ga0059261_2994	0.40	-0.5
3,116,349	+		Ga0059261_2994	0.40	-1.8
3,116,349	+		Ga0059261_2994	0.40	+0.5
3,116,349	+		Ga0059261_2994	0.40	-0.7
3,116,350	-		Ga0059261_2994	0.40	-0.7
3,116,350	-		Ga0059261_2994	0.40	+0.5
3,116,350	-		Ga0059261_2994	0.40	+0.1
3,116,350	-		Ga0059261_2994	0.40	-0.7
3,116,350	-		Ga0059261_2994	0.40	+0.4
3,116,392	+		Ga0059261_2994	0.43	-1.3
3,116,392	+		Ga0059261_2994	0.43	+0.2
3,116,524	+		Ga0059261_2994	0.51	-0.2
3,116,524	+		Ga0059261_2994	0.51	-0.1
3,116,524	+		Ga0059261_2994	0.51	-0.5
3,116,524	+		Ga0059261_2994	0.51	+1.1
3,116,525	-		Ga0059261_2994	0.51	+1.0
3,116,525	-		Ga0059261_2994	0.51	+1.0